DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trx-2 and CXXS2

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_001318396.1 Gene:CXXS2 / 818676 AraportID:AT2G40790 Length:154 Species:Arabidopsis thaliana


Alignment Length:100 Identity:32/100 - (32%)
Similarity:64/100 - (64%) Gaps:3/100 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VYQVKDKADLDGQLTKAS--GKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECE 64
            |:.|......:.::|:|:  ||::|::|.|:||.|.|.|.|...||::.:. :::.:.:||:|..
plant    42 VHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYT-SMIFVTIDVEELA 105

  Fly    65 DIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLE 99
            :.:.|:|:.:.||.||||:|.::::..|.:|..|:
plant   106 EFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAELQ 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 29/83 (35%)
CXXS2NP_001318396.1 TRX_family 49..138 CDD:239245 29/89 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10438
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X356
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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