DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trx-2 and Txn2

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_445783.1 Gene:Txn2 / 79462 RGDID:71040 Length:166 Species:Rattus norvegicus


Alignment Length:102 Identity:39/102 - (38%)
Similarity:65/102 - (63%) Gaps:4/102 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIA 67
            :.|:|..|...::.. |...||:||.|.||||||::.|:|.::..:....||:.|||:|:..|:|
  Rat    62 FNVQDGPDFQDRVVN-SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLA 125

  Fly    68 MEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDVIKA 104
            :||.:|::||.:.:|||..|::|.|.   :.||.::|
  Rat   126 IEYEVSAVPTVLAIKNGDVVDKFVGI---KDEDQLEA 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 35/84 (42%)
Txn2NP_445783.1 TRX_family 72..162 CDD:239245 36/92 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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