DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trx2 and txnl1

DIOPT Version :10

Sequence 1:NP_523526.1 Gene:Trx2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_001006844.1 Gene:txnl1 / 448593 XenbaseID:XB-GENE-965625 Length:289 Species:Xenopus tropicalis


Alignment Length:97 Identity:38/97 - (39%)
Similarity:58/97 - (59%) Gaps:1/97 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISS 74
            :..|.||.|..:|.|:.|....|.||..|:|....||.:: ...:.|:|||.:|:..|...|||:
 Frog    12 EFQGDLTAAGSRLSVVKFTMKGCAPCVRIAPAFTSLSNKY-PQAIFLEVDVHQCQATATANNISA 75

  Fly    75 MPTFVFLKNGVKVEEFAGANAKRLEDVIKANI 106
            .|||:|.:|.||::::.||:|..|||.||.::
 Frog    76 TPTFLFFRNKVKIDQYQGADAAGLEDKIKQHL 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx2NP_523526.1 TRX_family 18..103 CDD:239245 33/84 (39%)
txnl1NP_001006844.1 TRX_family 12..104 CDD:239245 36/92 (39%)
PITH 126..268 CDD:461848
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.