DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trx-2 and Txndc8

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_001004092.1 Gene:Txndc8 / 362525 RGDID:1303121 Length:127 Species:Rattus norvegicus


Alignment Length:125 Identity:41/125 - (32%)
Similarity:63/125 - (50%) Gaps:23/125 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECED 65
            ||.::|...:....|..|..:|||::|.|.||||||||:|....:|.|:. ||:..:||||..::
  Rat     1 MVQKIKSMREFKELLGAAGNRLVVVEFSAQWCGPCKMIAPAFQAMSLQYR-NVMFAQVDVDSSQE 64

  Fly    66 IAMEYNISSMPTFVFLKNGVKVE----------------------EFAGANAKRLEDVIK 103
            :....:|..:|||...|:..||.                      ||.||:.::||:.|:
  Rat    65 LTEHCSIQVVPTFQMFKHSRKVTPFSRLKRILCCFRSGPGSKKIFEFQGADIEKLEEKIQ 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 36/106 (34%)
Txndc8NP_001004092.1 Thioredoxin_like 1..89 CDD:412351 34/88 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54229
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10438
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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