DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trx-2 and Erp44

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_001008318.1 Gene:Erp44 / 298066 RGDID:1309176 Length:406 Species:Rattus norvegicus


Alignment Length:105 Identity:36/105 - (34%)
Similarity:53/105 - (50%) Gaps:10/105 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELS----TQFAD--NVVVLKVDVDECED 65
            |..::|..|..|...||  :|:|.||...:|:.|...|.|    .::.|  .||..:||.|:..|
  Rat    35 DSENIDEILNNADVALV--NFYADWCRFSQMLHPIFEEASDVIKEEYPDKNQVVFARVDCDQHSD 97

  Fly    66 IAMEYNISSMPTFVFLKNGVKVE-EFAG-ANAKRLEDVIK 103
            ||..|.||..||....:||:.:: |:.| .:.|.|.|.|:
  Rat    98 IAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIR 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 32/92 (35%)
Erp44NP_001008318.1 PDI_a_ERp44 29..136 CDD:239294 35/102 (34%)
PDI_b_ERp44 144..234 CDD:239368
Thioredoxin_6 167..350 CDD:290560
PDI_b'_ERp44 245..355 CDD:239370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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