DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Trx-2 and txl1

DIOPT Version :9

Sequence 1:	NP_523526.1	Gene:	Trx-2 / 34281	FlyBaseID:	FBgn0040070	Length:	106	Species:	Drosophila melanogaster
Sequence 2:	NP_595306.1	Gene:	txl1 / 2541028	PomBaseID:	SPBC577.08c	Length:	290	Species:	Schizosaccharomyces pombe

Alignment Length:	85	Identity:	37/85 - (43%)
Similarity:	54/85 - (63%)	Gaps:	2/85 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDECEDIAMEYNISSMPTFVFLK 82
            ||.|.| |.:|.||||||.|||...:|::::|. ..|..||:|||...||....:.:||||||.:
pombe    19 SGYLAV-DCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFE 82

  Fly    83 NGVKVEEFAGANAKRLEDVI 102
            ||.:::...|||.:.|::.:
pombe    83 NGKQIDMLTGANPQALKEKV 102

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Trx-2	NP_523526.1	TRX_family	18..103	CDD:239245	37/85 (44%)
txl1	NP_595306.1	TRX_family	10..103	CDD:239245	37/85 (44%)
txl1	NP_595306.1	PITH	129..275	CDD:283785
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100096
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1557
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.840