DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trx-2 and Y55F3AR.2

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_500036.2 Gene:Y55F3AR.2 / 176929 WormBaseID:WBGene00021933 Length:254 Species:Caenorhabditis elegans


Alignment Length:101 Identity:40/101 - (39%)
Similarity:59/101 - (58%) Gaps:1/101 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDI 66
            |..|...:|.|.:.:..:||.|.:||.|:|||||:.|:|...:|:.|:..: |.||||||||...
 Worm     3 VIVVNGDSDFDRKFSAGNGKAVFVDFTASWCGPCQYIAPIFSDLANQYKGS-VFLKVDVDECRGT 66

  Fly    67 AMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDVI 102
            |..|.:::||||:...||.|.....||:...|..::
 Worm    67 AATYGVNAMPTFIAFVNGQKKATIQGADESGLRSMV 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 36/85 (42%)
Y55F3AR.2NP_500036.2 TRX_family 10..103 CDD:239245 38/94 (40%)
DUF4605 157..212 CDD:373801
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157684
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.985475 Normalized mean entropy S646
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1557
SonicParanoid 1 1.000 - - X356
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.730

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