DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trx-2 and txl-1

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_491127.1 Gene:txl-1 / 171897 WormBaseID:WBGene00021826 Length:284 Species:Caenorhabditis elegans


Alignment Length:102 Identity:50/102 - (49%)
Similarity:67/102 - (65%) Gaps:1/102 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDI 66
            |..|||..|...||:.|..|.|::||.|.||||||||:|....||.|:. ..|.|||||:.||..
 Worm     3 VINVKDDEDFRNQLSLAGLKSVIVDFTAVWCGPCKMIAPTFEALSNQYL-GAVFLKVDVEICEKT 66

  Fly    67 AMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDVIK 103
            :.|..::|||||:..::||:||:..||:||.||.::|
 Worm    67 SSENGVNSMPTFMVFQSGVRVEQMKGADAKALETMVK 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 42/84 (50%)
txl-1NP_491127.1 TRX_family 10..103 CDD:239245 45/93 (48%)
PITH 121..262 CDD:283785
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1557
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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