DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trx-2 and Txn1

DIOPT Version :9

Sequence 1:NP_523526.1 Gene:Trx-2 / 34281 FlyBaseID:FBgn0040070 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_446252.1 Gene:Txn1 / 116484 RGDID:621157 Length:105 Species:Rattus norvegicus


Alignment Length:102 Identity:51/102 - (50%)
Similarity:66/102 - (64%) Gaps:1/102 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECED 65
            ||..::.|......|..|..||||:||.||||||||||.|....|..::: |||.|:||||:|:|
  Rat     1 MVKLIESKEAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYS-NVVFLEVDVDDCQD 64

  Fly    66 IAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDVI 102
            :|.:..:..||||.|.|.|.||.||:|||.::||..|
  Rat    65 VAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEATI 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trx-2NP_523526.1 TRX_family 18..103 CDD:239245 47/85 (55%)
Txn1NP_446252.1 Thioredoxin 2..103 CDD:395038 50/101 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0907
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128202
Inparanoid 1 1.050 101 1.000 Inparanoid score I4882
OMA 1 1.010 - - QHG54229
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 1 1.100 - - LDO PTHR10438
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X356
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

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