DRSC/TRiP Functional Genomics Resources

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Protein Alignment gcm2 and GCM1

DIOPT Version :9

Sequence 1:NP_609302.1 Gene:gcm2 / 34280 FlyBaseID:FBgn0019809 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_016866879.1 Gene:GCM1 / 8521 HGNCID:4197 Length:498 Species:Homo sapiens


Alignment Length:482 Identity:155/482 - (32%)
Similarity:217/482 - (45%) Gaps:106/482 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VQPQSQSTHSVHPGP---SPGQQQAGGSMTM-------PSSSTGKGKR----------------- 65
            :.|.|..::.....|   |||.:...|.:.:       ..||..:|.|                 
Human     4 IHPTSCCSYDTQRNPRKQSPGPRCLSGPIQLYQEPLRTKFSSISEGSRIGENLGWPDLIMEPDDF 68

  Fly    66 --------EWDINDAIVPHVPDQEFDEFNEWSDGHVRHIYSLHNEEAKKHISGWAMRNTNNHNVN 122
                    .|||||..:|. ..::.|.|.||.|.:.:||||..::.|::|:|.||||||||||..
Human    69 DSEDKEILSWDINDVKLPQ-NVKKTDWFQEWPDSYAKHIYSSEDKNAQRHLSSWAMRNTNNHNSR 132

  Fly   123 ILKKSCLGVLVCSQHCTLPNGSKINLRPAICDKARRKQEGKACPNKSCRGGRLEIKPCRGHCGYP 187
            |||||||||:||.:.|....|.||.||||||||||:||:.|.|||  | .|.|::.|||||.|:|
Human   133 ILKKSCLGVVVCGRDCLAEEGRKIYLRPAICDKARQKQQRKRCPN--C-DGPLKLIPCRGHGGFP 194

  Fly   188 VTHFWRHSGNAIFFQAKGVHDHLRPDPKNSSVSKRAFGRVPLAGKSANGSVAKKSVIAGLVKQAK 252
            ||:||||.|..||||:||.|||.:|:.|..:.::||..:|..|..|.:.|:...:....|..:.:
Human   195 VTNFWRHDGRFIFFQSKGEHDHPKPETKLEAEARRAMKKVNTAPSSVSLSLKGSTETRSLPGETQ 259

  Fly   253 QQHSLISKVLKRPAVSNP---LAHTALDIYQYNACGKCAGYSHCTCSY-------LDDSTTA--- 304
            .|.||......:..|..|   ..|...:..|.|:...|..:|.   ||       |.|.|:.   
Human   260 SQGSLPLTWSFQEGVQLPGSYSGHLIANTPQQNSLNDCFSFSK---SYGLGGITDLTDQTSTVDP 321

  Fly   305 ----RSHQLSQSSNYGTNS-WPLSGS-------ESSAPCETAANVFTVNHQHIT----YNYPIYH 353
                ...:||.|..|.:.. .|.|.|       :..|..:.||    :...|:.    .||| :.
Human   322 MKLYEKRKLSSSRTYSSGDLLPPSASGVYSDHGDLQAWSKNAA----LGRNHLADNCYSNYP-FP 381

  Fly   354 ATPAAATAAPSKSPSLPYACSISELAAYQQ-----------------SSSGNSFAMGVPVHGHTQ 401
            .|....:.:||::.|.|:         |||                 :.:||.:...|.|..::.
Human   382 LTSWPCSFSPSQNSSEPF---------YQQLPLEPPAAKTGCPPLWPNPAGNLYEEKVHVDFNSY 437

  Fly   402 CQAVAYDSSPQLATPEPEFINYSQIKH 428
            .|:.|| .|||   .:|....|:...|
Human   438 VQSPAY-HSPQ---EDPFLFTYASHPH 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gcm2NP_609302.1 GCM 82..222 CDD:281598 81/139 (58%)
GCM1XP_016866879.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165145946
Domainoid 1 1.000 208 1.000 Domainoid score I2859
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003094
OrthoInspector 1 1.000 - - mtm8555
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12414
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4583
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.970

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