DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4382 and Nlgn1

DIOPT Version :10

Sequence 1:NP_609301.2 Gene:CG4382 / 34279 FlyBaseID:FBgn0032132 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_038957495.1 Gene:Nlgn1 / 116647 RGDID:621117 Length:863 Species:Rattus norvegicus


Alignment Length:694 Identity:185/694 - (26%)
Similarity:280/694 - (40%) Gaps:178/694 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWR---LC------GFVLLLCGLASGQNSDEDLSKAIPDEEDPIGSNKELSDLVITTALGKIRGT 56
            :||   .|      |..|.||.|.....:...||:.: |:.||:          :||..||||| 
  Rat    12 VWRAMMACVVHRGSGAPLTLCLLGCLLQTFHVLSQKL-DDVDPL----------VTTNFGKIRG- 64

  Fly    57 ILPSQSGRNFYA----FRGIPYAKPPVDRLRFQPPEPVEQWFDTLDATFDGPKCPQ--------- 108
             :..:.......    |.|:|||.||....|||||||...|.|..:||...|.|||         
  Rat    65 -IKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNATQFAPVCPQNIIDGRLPE 128

  Fly   109 ----------LGLVSG---DVSEDCLRVNIY----------------------------TKELPS 132
                      |.:||.   |.|||||.:|||                            ||....
  Rat   129 VMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKICRKGGPLTKTQTD 193

  Fly   133 ESQPNVR------------RPVIVFIHPGGFYSLSGQSKNFAGPQYFMNRRLVLVTFNYRLGSLG 185
            :...|.|            :||:|:|| ||.| :.|....:.|........::::|.|||||.||
  Rat   194 DLGDNDRAEDEDIRDSGGPKPVMVYIH-GGSY-MEGTGNLYDGSVLASYGNVIVITVNYRLGVLG 256

  Fly   186 FLATGTREAPGNMGLKDQVQLLRWVKLHISRFGGDPSSITLLGYGAGAMAVTLHMVSPMS----- 245
            ||:||.:.|.||.||.|.:|.|||...:|..|||||..||:.|.|||...|.|..:|..|     
  Rat   257 FLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEGNRW 321

  Fly   246 ----RGLFHKAIVMSGAVTGQWSLPDHQMDVATKQATLLHCHTENVTEMMDCLKGKHYLEFA--N 304
                :|||.:||..||.....|::.......|...||.:.|:..:..|:::||:.|.|.|..  :
  Rat   322 SNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARILATKVGCNVSDTVELVECLQKKPYKELVDQD 386

  Fly   305 TLPKMFEFDRNNPLILWKPVIEPDFGQERFLVEEPIRSYQNDDFMKVPIITGMTKDEFVGPALSI 369
            ..|..:.       |.:.|||:.|     .:.::|....:..:|:...|:.|:.:.|.:....:|
  Rat   387 VQPARYH-------IAFGPVIDGD-----VIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVENI 439

  Fly   370 LQSPTLLSALNENFESLAPVFFMYNTSDARACNISQELRNHY-FPDKLIDANRSLEALSNLYSD- 432
            :.|...:||.:.:|.                  :|..:.|.| :|:.. |..|  |.:..:|:| 
  Rat   440 VDSDDGVSASDFDFA------------------VSNFVDNLYGYPEGK-DVLR--ETIKFMYTDW 483

  Fly   433 ------------ALTGFGIHRFVHLAARS--------TKVYYYRFSYQGARSHIYYPEDAPYGVV 477
                        .|..|..|::|..|..:        :..|:|.|.:......:....||.:|  
  Rat   484 ADRHNPETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAWADAAHG-- 546

  Fly   478 HHDDLMYLFVEPSISRM------FTEDDDEFRMVDIMVRMFSAFAYKGDPNKPTDL--------- 527
              |::.|:...|.|...      |:::|  ..:..:::..::.||..||||:|...         
  Rat   547 --DEVPYVLGIPMIGPTELFPCNFSKND--VMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKP 607

  Fly   528 -ALRDIRWRPFSFKKRYYLDIGKHITLEENLNAENYEIWKRLFP 570
             ...::.|..:|.|.:.||.||....::|:..|....:|..|.|
  Rat   608 NRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVP 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4382NP_609301.2 COesterase 42..565 CDD:395084 169/637 (27%)
Nlgn1XP_038957495.1 COesterase 52..646 CDD:395084 171/646 (26%)

Return to query results.
Submit another query.