DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and Hadha

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_849209.1 Gene:Hadha / 97212 MGIID:2135593 Length:763 Species:Mus musculus


Alignment Length:781 Identity:437/781 - (55%)
Similarity:566/781 - (72%) Gaps:25/781 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSATRFLSAVGQISRQQLLQNKCTRALPISA-QLLQRR----RLMSTNPAPVANKHLHTKVVNGV 60
            |.|:|   |:|.:||             .|| ::|:.|    |..:|:.|.:...|::..|...|
Mouse     1 MVASR---AIGSLSR-------------FSAFRILRSRGCICRSFTTSSALLTRTHINYGVKGDV 49

  Fly    61 LVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGKPGCFVAGADIGMLEACQTAE 125
            .||:|:|||:|||:|..||..||..|:.::..|..:.||||||.|||||||||||.||.:|.|.:
Mouse    50 AVIRINSPNSKVNTLNKEVQSEFIEVMNEIWANDQIRSAVLISSKPGCFVAGADINMLSSCTTPQ 114

  Fly   126 EATLISHGAQVMFDRMERSKKPIVAAISGVCLGGGLELALACHYRIATKDSKTKLGLPEVMLGLL 190
            |||.||...|.||:::|:|.||:||||||.|||||||||:||.|||||||.||.||:|||:||:|
Mouse   115 EATRISQEGQRMFEKLEKSPKPVVAAISGSCLGGGLELAIACQYRIATKDRKTVLGVPEVLLGIL 179

  Fly   191 PGGGGTVRLPKLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDPLGPGLQPAEQNTIEYLEKTA 255
            ||.|||.||||:..||.|.||.|||:.:||||||::|:||.||:|||||::..|:.||||||:.|
Mouse   180 PGAGGTQRLPKMVGVPAAFDMMLTGRNIRADRAKKMGLVDQLVEPLGPGIKSPEERTIEYLEEVA 244

  Fly   256 VQVANDLASGKLRVNREKSGLVSKIQSFVMDTDFVKNKIFDTARKQVLKASNGLYPAPLKILDVI 320
            |..|..||..|:...:.| |||.|:.::.|...||:.:::.|..::|.|.:.|||||||||:|.:
Mouse   245 VNFAKGLADRKVSAKQSK-GLVEKLTTYAMTVPFVRQQVYKTVEEKVKKQTKGLYPAPLKIIDAV 308

  Fly   321 RAGVDKGTDAGYEAERKGFGELSATPESKGLIALFRGQTECKKNRFGKPERPVKTVGVLGAGLMG 385
            :||:::|:||||.||.:.||||:.|.|||.|:.|:.||..||||:||.|::.|:.:.:|||||||
Mouse   309 KAGLEQGSDAGYLAESQKFGELALTKESKALMGLYNGQVLCKKNKFGAPQKNVQQLAILGAGLMG 373

  Fly   386 AGIVQVSVDKGYQVVMKDATEAGLARGIGQVQKGLETAVKRKRISALERDQTLASLRPTLDYSDF 450
            |||.|||||||.:.::||.|..||.||..||.|||...||:|.:::.|||...::|...|||..|
Mouse   374 AGIAQVSVDKGLKTLLKDTTVTGLGRGQQQVFKGLNDKVKKKALTSFERDSIFSNLIGQLDYKGF 438

  Fly   451 KNADIIIEAVFEDIKVKHRVIKELEAVVPEHCVIATNTSAIPITKIAAGSSRPEKVVGMHYFSPV 515
            :.||::|||||||:.|||:|:||:|:|.||||:.|:||||:||.:|||.|.|||||:||||||||
Mouse   439 EKADMVIEAVFEDLGVKHKVLKEVESVTPEHCIFASNTSALPINQIAAVSKRPEKVIGMHYFSPV 503

  Fly   516 DKMQLLEIITHPGTSKDTIAQAVAVGLKQGKVVITVGDGPGFYTTRILSTMLSEAIRLLQEGVDP 580
            ||||||||||...|||||.|.||||||:||||:|.|.|||||||||.|:.|:||.:|:|||||||
Mouse   504 DKMQLLEIITTDKTSKDTTASAVAVGLRQGKVIIVVKDGPGFYTTRCLAPMMSEVMRILQEGVDP 568

  Fly   581 KDLDQYTKKFGFPVGAATLADEVGIDVGSHIAVDLAKAFGERFSGGNLEVMNDLVLAGFLGRKSG 645
            |.||..|..|||||||||||||||:||..|:|.||.|||||||.||::|::..:|..||||||||
Mouse   569 KKLDALTTGFGFPVGAATLADEVGVDVAQHVAEDLGKAFGERFGGGSVELLKQMVSKGFLGRKSG 633

  Fly   646 KGIFLY-DGQKRGTRPVNNDALEIVKQKYALVSKGANAPEDLTLRMVSRFINEAVLCLEEKILDS 709
            ||.::| :|.|  .:.:|::...|:...........::.||:..|:::||:|||||||:|.||.:
Mouse   634 KGFYIYQEGSK--NKSLNSEMDNILANLRLPAKPEVSSDEDVQYRVITRFVNEAVLCLQEGILAT 696

  Fly   710 PLEGDVGAVFGLGFPPFSGGPFRWVDQYGAGKLVSKMQSYAELYGAPFKPAQTLLDMAKDPSKKF 774
            |.|||:||||||||||..|||||:||.|||.|:|.:::.|...||..|.|.|.|||.|.:.||||
Mouse   697 PAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRKYESAYGTQFTPCQLLLDHANNSSKKF 761

  Fly   775 Y 775
            |
Mouse   762 Y 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 424/737 (58%)
crotonase-like 52..235 CDD:119339 113/182 (62%)
3HCDH_N 375..553 CDD:280833 113/177 (64%)
3HCDH 556..651 CDD:279114 64/94 (68%)
3HCDH 689..768 CDD:279114 48/78 (62%)
HadhaNP_849209.1 fa_ox_alpha_mit 27..762 CDD:131494 424/737 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850191
Domainoid 1 1.000 230 1.000 Domainoid score I2449
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H152
Inparanoid 1 1.050 853 1.000 Inparanoid score I431
Isobase 1 0.950 - 0 Normalized mean entropy S2122
OMA 1 1.010 - - QHG63238
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001577
OrthoInspector 1 1.000 - - oto94162
orthoMCL 1 0.900 - - OOG6_101291
Panther 1 1.100 - - LDO PTHR43612
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4232
SonicParanoid 1 1.000 - - X1128
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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