DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mtpalpha and Echs1

DIOPT Version :10

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_444349.1 Gene:Echs1 / 93747 MGIID:2136460 Length:290 Species:Mus musculus


Alignment Length:241 Identity:73/241 - (30%)
Similarity:129/241 - (53%) Gaps:25/241 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 NGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGKPGCFVAGADIGMLE--A 120
            :.|.:|:::.|.| :|:|.:.:.:|..:.::..|.:||| .|::::|....|.|||||..::  .
Mouse    45 SSVGLIQLNRPKA-LNALCNGLIEELNQALETFEQDPAV-GAIVLTGGDKAFAAGADIKEMQNRT 107

  Fly   121 CQTAEEATLISHGAQVMFDRMERSKKPIVAAISGVCLGGGLELALACHYRIATKDSKTKLGLPEV 185
            .|....:..:||     :|.:.|.|||::||::|..||||.|||:.|.  |.....|.:.|.||:
Mouse   108 FQDCYSSKFLSH-----WDHITRVKKPVIAAVNGYALGGGCELAMMCD--IIYAGEKAQFGQPEI 165

  Fly   186 MLGLLPGGGGTVRLPKLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDPLGPGLQPAEQNTIEY 250
            :||.:||.|||.||.:......|::|.|||.::.|..||:.|:|..:.             .:|.
Mouse   166 LLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIF-------------PVEK 217

  Fly   251 LEKTAVQVANDLAS-GKLRVNREKSGLVSKIQSFVMDTDFVKNKIF 295
            |.:.|:|.|..:|| .|:.|...|..:.:..:..:.:.:.::.::|
Mouse   218 LVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGNKLEKRLF 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 73/241 (30%)
Echs1NP_444349.1 crotonase-like 32..288 CDD:474030 73/241 (30%)

Return to query results.
Submit another query.