DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and Echdc2

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_081004.2 Gene:Echdc2 / 52430 MGIID:1289238 Length:296 Species:Mus musculus


Alignment Length:247 Identity:77/247 - (31%)
Similarity:112/247 - (45%) Gaps:7/247 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LPISAQLLQRRRLMS--TNPAPVANKHLHTKVVNGVLVIKIDSPNAKVNSLGSEVSDEFERVIKD 89
            ||.|.:....|...|  |...|.......|....|:..|.::.|||: |:||:....|....:..
Mouse    11 LPCSWRFSGARDCASHATTRTPEIQVQALTGPNQGITEILMNRPNAR-NALGNVFVSELLEALAQ 74

  Fly    90 LETNPAVNSAVLISGKPGCFVAGADIGMLEACQTAEEATLISHGAQVMFDRMERSKKPIVAAISG 154
            |..:..|...:..|...|.|.||||:...|.....|..|.:.. .:.:...:.....|.:||:.|
Mouse    75 LREDQQVRVLLFRSAVKGVFCAGADLKEREQMSDVEVGTFVQR-LRGLMSEIAAFPVPTIAAMDG 138

  Fly   155 VCLGGGLELALACHYRIATKDSKTKLGLPEVMLGLLPGGGGTVRLPKLTSVPTALDMELTGKQVR 219
            ..|||||||||||..|||.  |...:||.|...|||||.|||.|||:...|..|.::..||:::.
Mouse   139 FALGGGLELALACDLRIAA--SSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLN 201

  Fly   220 ADRAKRLGIVDLLVDPLGPGLQPAEQNTIEYLEKTAVQVANDLASGKLRVNR 271
            ..:|:.||:|:..|.....| ..|....:...::...|....:..||:.::|
Mouse   202 GAQARELGLVNHAVAQNEEG-NAAYHRALALAQEILPQAPIAVRLGKVAIDR 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 73/236 (31%)
crotonase-like 52..235 CDD:119339 64/182 (35%)
3HCDH_N 375..553 CDD:280833
3HCDH 556..651 CDD:279114
3HCDH 689..768 CDD:279114
Echdc2NP_081004.2 crotonase-like 42..296 CDD:304874 69/216 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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