DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and Srlp

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_650199.1 Gene:Srlp / 41533 FlyBaseID:FBgn0038049 Length:378 Species:Drosophila melanogaster


Alignment Length:323 Identity:86/323 - (26%)
Similarity:146/323 - (45%) Gaps:62/323 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GQISRQQLLQNKCTRALPISAQLLQRRRLMSTNPA-----PVANKHLHTKVVNGVLVIKIDSPNA 70
            |.:::|...|.:.|.|    ::.....:.:..:||     ....|::..:....:.:|.|:.|..
  Fly     7 GLLAQQVGQQARFTAA----SRTFSSTKALHKDPATQEAEAAPPKNILVEKDKNITLIGINRPQQ 67

  Fly    71 K--VNSL-GSEVSDEFERVIKDLETNPAVNSAVLISGKPGCFVAGADIGMLEACQTAEEATLISH 132
            :  ::|| .|::.|.|.....| :|:|.   |||. |..|.|.:|.||  ||.....:|...:. 
  Fly    68 RNAIDSLTASQLCDAFANFEAD-DTSPV---AVLY-GVGGSFCSGFDI--LEISTDEKEEISVD- 124

  Fly   133 GAQVMFDRMERS--------KKPIVAAISGVCLGGGLELALACHYRIATKDS-----KTKLGLPE 184
                :..|.|.|        |||:|..|:|.|:..||||||.|..|:..:.:     ..:.|:| 
  Fly   125 ----ILMRPEGSVGPTRRQIKKPVVCGINGYCIANGLELALMCDLRVMEESAVLGFFNRRFGVP- 184

  Fly   185 VMLGLLPGGGGTVRLPKLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDPLGPGLQPAEQNTIE 249
             ||     ..||:|||.:..:..|||:.|||:.|.:..|..:|:|:.:| |.|..|         
  Fly   185 -ML-----DAGTIRLPAMIGLSRALDLILTGRPVGSQEAHDIGLVNRIV-PTGTAL--------- 233

  Fly   250 YLEKTAVQVANDLASGKLR-VNREKSGLVSKIQSFVMDT--DFVKNKIFDTARKQVLKASNGL 309
               ..|:::|..||....| :..:::.:.|  .:|...|  ..|:|::..|:|:.:....||:
  Fly   234 ---GNALELATCLAKFPQRALIHDRNSVYS--STFETSTFHQAVQNEVMFTSREIIEDMQNGI 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 81/296 (27%)
crotonase-like 52..235 CDD:119339 61/198 (31%)
3HCDH_N 375..553 CDD:280833
3HCDH 556..651 CDD:279114
3HCDH 689..768 CDD:279114
SrlpNP_650199.1 crotonase-like 49..259 CDD:304874 69/241 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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