DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and HIPP1

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_649261.1 Gene:HIPP1 / 40302 FlyBaseID:FBgn0037027 Length:926 Species:Drosophila melanogaster


Alignment Length:419 Identity:85/419 - (20%)
Similarity:148/419 - (35%) Gaps:129/419 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 PGLQPAE-----QNTIEYLEKTA--VQVANDLASGKLRVNREKSGL---------VSKIQSFVMD 286
            ||::..|     ...:|.|.::|  ..:.|:||:  |..:.|..||         ::|:.: :..
  Fly    22 PGVEKVETLELKTAALETLSESAGPTDLENELAN--LNGSEEGPGLDELSTLEREIAKLHN-IRP 83

  Fly   287 TDFVKNKIFDTARKQVLKASNGLYP--AP--LKILDVIRAGVDKGTDAGYEAERKGFGELSATP- 346
            .| ..:::.|:.....|..:.||.|  ||  .|....|   :::|..|      .|.|:.|.:| 
  Fly    84 PD-AASEVKDSDTPIALADNGGLEPRQAPDEAKCRTPI---IEEGNAA------SGNGQSSESPL 138

  Fly   347 ESKGLIALFR----------GQTECKKNRFGKPERPVKTVGVLGAGLMGAG---IVQVSVDKGYQ 398
            |...||||.:          |:.:|...:.......|...|.:|..:.|.|   |:::..|:|..
  Fly   139 EEVDLIALLKGTDTSHDQPTGEEKCTLEKALSELDGVGEDGDVGVTIEGEGQFEIMEIDDDEGES 203

  Fly   399 VVMKDATEAGLARGIGQVQKGLETAVKRK------RISALERDQTLASLRPTL------------ 445
            ...|.:.:...::.|  ....|.:..|.|      |..|||:   :|.|:|..            
  Fly   204 SSRKASPKVPASKPI--KSNSLPSISKHKLSPEQARAVALEQ---MAGLKPKSRRKEPPAPPSVV 263

  Fly   446 -----------DYSDFKNADIIIEAVFEDIKVKHRVIKELEAVVPEHCVIATNTSAIPITKIAAG 499
                       |:.|:.:         |:.|....::.|:..:...|  :.|....:|:.|:   
  Fly   264 APIDIVSSLNDDWDDYDS---------EEDKSASALVTEVITLPSAH--VVTKKPPLPVKKL--- 314

  Fly   500 SSRPEKVVGMHYFSPVDKMQLLEIITHPGTSKDTIAQ---AVAVGLKQGKVVITVGDGPGFYTTR 561
             |.|.|      .||...:.|...|:.......|::|   |.:.|....|...||...|      
  Fly   315 -SSPVK------HSPNSAILLNNKISGVKVMLKTVSQKQLAASTGAAAEKTKPTVVVSP------ 366

  Fly   562 ILSTMLSEAIRLLQEGVDPKDLDQYTKKF 590
                              ||:.:::|..|
  Fly   367 ------------------PKETEEHTTGF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 85/419 (20%)
crotonase-like 52..235 CDD:119339
3HCDH_N 375..553 CDD:280833 42/212 (20%)
3HCDH 556..651 CDD:279114 4/35 (11%)
3HCDH 689..768 CDD:279114
HIPP1NP_649261.1 crotonase-like 673..870 CDD:119339
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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