DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mtpalpha and hadha

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_989224.1 Gene:hadha / 394832 XenbaseID:XB-GENE-959219 Length:760 Species:Xenopus tropicalis


Alignment Length:777 Identity:440/777 - (56%)
Similarity:576/777 - (74%) Gaps:20/777 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSATRFLSAVGQISRQQLLQNKCTRALPISAQLLQRRRLMSTNPAPVANKHLHTKVVNGVLVIKI 65
            |:|.|.:..:.::.........| |.|.:|:.||.|             .|::.::.:.|.|::.
 Frog     1 MAAARLVGVLARLGGANRTGYTC-RHLSMSSALLTR-------------THVNYEIKDDVAVVRF 51

  Fly    66 DSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGKPGCFVAGADIGMLEACQTAEEATLI 130
            ::||:|||:|..::..||..|:.::..|.||.||||||.|||||:|||||.|:|:|:|::|.|.:
 Frog    52 NTPNSKVNTLSKQLQTEFSDVMNEIWANDAVQSAVLISSKPGCFIAGADINMIESCKTSQEVTQL 116

  Fly   131 SHGAQVMFDRMERSKKPIVAAISGVCLGGGLELALACHYRIATKDSKTKLGLPEVMLGLLPGGGG 195
            |...|.||.::|:|.|||||||:|.|||||||:|:||.||:||||.||.||.|||:||||||.||
 Frog   117 SQEGQKMFAKLEKSPKPIVAAINGSCLGGGLEVAIACQYRVATKDKKTVLGTPEVLLGLLPGAGG 181

  Fly   196 TVRLPKLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDPLGPGLQPAEQNTIEYLEKTAVQVAN 260
            |.|||::..:|||.||.|||:.:|||||||:|:||.|||||||||:..|..||||||:.||..|.
 Frog   182 TQRLPRMVGLPTAFDMMLTGRNIRADRAKRMGLVDQLVDPLGPGLKSPEDRTIEYLEEVAVDCAR 246

  Fly   261 DLASGKLRVNREKSGLVSKIQSFVMDTDFVKNKIFDTARKQVLKASNGLYPAPLKILDVIRAGVD 325
            .:|..|:.:.:|| ||:.|:..:||...||:.:|:.|..|:|.|.:.|||||||||::|:|.|:|
 Frog   247 GIAKKKISLKKEK-GLMQKVTDYVMSVPFVRQQIYKTVEKKVNKQTKGLYPAPLKIIEVVRTGLD 310

  Fly   326 KGTDAGYEAERKGFGELSATPESKGLIALFRGQTECKKNRFGKPERPVKTVGVLGAGLMGAGIVQ 390
            :|.:|||.||.:.||||..|||||.||.|:.||..||||:||.|||||:.:.:||||||||||.|
 Frog   311 QGQEAGYLAEAQKFGELGTTPESKALIGLYHGQVICKKNKFGTPERPVQKLAILGAGLMGAGIAQ 375

  Fly   391 VSVDKGYQVVMKDATEAGLARGIGQVQKGLETAVKRKRISALERDQTLASLRPTLDYSDFKNADI 455
            ||||||.:.::||.|..||.||..||.|||...||:|.:::.|||..:::|...|||..|:.||:
 Frog   376 VSVDKGLKTILKDTTVEGLGRGQQQVYKGLNDKVKKKSLTSFERDSIVSNLTGQLDYKGFETADM 440

  Fly   456 IIEAVFEDIKVKHRVIKELEAVVPEHCVIATNTSAIPITKIAAGSSRPEKVVGMHYFSPVDKMQL 520
            :||||||||::||:|::|:|||||.||:.|:||||:||::|||.|.|||||:|||||||||||||
 Frog   441 VIEAVFEDIRIKHKVLQEVEAVVPPHCIFASNTSALPISQIAAASKRPEKVIGMHYFSPVDKMQL 505

  Fly   521 LEIITHPGTSKDTIAQAVAVGLKQGKVVITVGDGPGFYTTRILSTMLSEAIRLLQEGVDPKDLDQ 585
            |||||...|||||.|.|||||||||||:|.|.|||||||||.|..|::|.:|:||||||||.||.
 Frog   506 LEIITTDKTSKDTTAAAVAVGLKQGKVIIVVKDGPGFYTTRCLGPMMAEVVRVLQEGVDPKKLDA 570

  Fly   586 YTKKFGFPVGAATLADEVGIDVGSHIAVDLAKAFGERFSGGNLEVMNDLVLAGFLGRKSGKGIFL 650
            .:..|||||||:||||||||||.:|:|.||.|||||||.|||:|::..:|..||||||||||.::
 Frog   571 LSTGFGFPVGASTLADEVGIDVAAHVAEDLGKAFGERFGGGNIELLKAMVAKGFLGRKSGKGFYI 635

  Fly   651 Y-DGQKRGTRPVNNDALEIVKQKYALVSK-GANAPEDLTLRMVSRFINEAVLCLEEKILDSPLEG 713
            | .|.|  .|.:|:...||: :|:.|.:| ..::.||:.||:|:||:||||:||:|.||.:|:||
 Frog   636 YQQGVK--NRSINSGTEEIL-EKFKLQAKPEVSSNEDIQLRLVTRFVNEAVMCLQEGILANPVEG 697

  Fly   714 DVGAVFGLGFPPFSGGPFRWVDQYGAGKLVSKMQSYAELYGAPFKPAQTLLDMAKDPSKKFY 775
            |:||||||||||..|||||:.|.:||.::|.||:.|..:||:.|.|.|.|||.|.||||||:
 Frog   698 DIGAVFGLGFPPCLGGPFRYADAFGAKRIVEKMRKYESVYGSQFTPCQLLLDHASDPSKKFH 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 429/738 (58%)
crotonase-like 52..235 CDD:119339 105/182 (58%)
3HCDH_N 375..553 CDD:280833 114/177 (64%)
3HCDH 556..651 CDD:279114 63/94 (67%)
3HCDH 689..768 CDD:279114 47/78 (60%)
hadhaNP_989224.1 fa_ox_alpha_mit 24..759 CDD:131494 435/751 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 234 1.000 Domainoid score I2331
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H152
Inparanoid 1 1.050 877 1.000 Inparanoid score I400
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D134602at33208
OrthoFinder 1 1.000 - - FOG0001577
OrthoInspector 1 1.000 - - oto104372
Panther 1 1.100 - - LDO PTHR43612
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1128
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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