DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and Cdyl

DIOPT Version :10

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:XP_017456089.1 Gene:Cdyl / 361237 RGDID:1549745 Length:617 Species:Rattus norvegicus


Alignment Length:224 Identity:57/224 - (25%)
Similarity:95/224 - (42%) Gaps:22/224 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 NGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNS-AVLISGKPGCFVAGADIGMLEAC 121
            :|...|.:.:.:::.|||..||..|.:..   |.|..|.:| .||:|.....|..|.|.......
  Rat   369 DGFTHILLSTKSSENNSLNPEVMKEVQSA---LSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRR 430

  Fly   122 QTAE---EATLISHGAQVMFDRMERSKKPIVAAISGVCLGGGLELALACHYRIATKDSKTKLGLP 183
            .|.:   |:|.::...:...:...:.||||:.|::|..:|.|..:...|.  :...:.|.....|
  Rat   431 LTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCD--VVWANEKAWFQTP 493

  Fly   184 EVMLGLLPGGGGTVRLPKLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDPLGPGLQPAEQNTI 248
            ....|..|.|..||..||:....:|.:|.|:|:::.|..|...|:|..:   ..||         
  Rat   494 YTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQV---FWPG--------- 546

  Fly   249 EYLEKTAVQVANDLASGKLRVNREKSGLV 277
            .:.::..|:: .:|||....|..|...||
  Rat   547 TFTQEVMVRI-KELASCNPIVLEESKALV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 57/224 (25%)
CdylXP_017456089.1 CD_CDY 56..105 CDD:349284
crotonase-like 363..559 CDD:119339 50/207 (24%)
Blue background indicates that the domain is not in the aligned region.

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