DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and CG4592

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001260306.1 Gene:CG4592 / 34317 FlyBaseID:FBgn0032162 Length:287 Species:Drosophila melanogaster


Alignment Length:186 Identity:47/186 - (25%)
Similarity:75/186 - (40%) Gaps:32/186 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 NGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGKPGCFVAGADIG-MLEAC 121
            :|:..:.::.|  .||:|..|:..:....|..:|:|.: ...:|.|.....|.||.|:. ||.  
  Fly    43 SGIATLSMNLP--PVNTLTMELMHDLIDSINQIESNKS-RGLILTSSNDKVFSAGLDLNEMLN-- 102

  Fly   122 QTAEEATLISHGAQVMFDRMERSKKPIVAAISGVCLGGGLELALACHYRIATKDSKTKLGLPEVM 186
            ...|...|.....|.::..:.....|..|||:|.....|..||.||.||:.         ||.:.
  Fly   103 PDVERLRLFWTRFQDLWLALHLCGLPTAAAINGHSPAAGCVLATACEYRVM---------LPNLF 158

  Fly   187 LGL------------LPGGGGTVRLPKLTSVPTALDMELTGKQVRADRAKRLGIVD 230
            :|:            :.....:| ||: ..|..||:.   ||...:..|..:|:||
  Fly   159 IGIHATRFSFVISKWMMNSYQSV-LPR-RIVERALNQ---GKLFASQEALDVGLVD 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 47/186 (25%)
crotonase-like 52..235 CDD:119339 47/186 (25%)
3HCDH_N 375..553 CDD:280833
3HCDH 556..651 CDD:279114
3HCDH 689..768 CDD:279114
CG4592NP_001260306.1 crotonase-like 43..284 CDD:304874 47/186 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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