DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and CG4598

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001260304.1 Gene:CG4598 / 34315 FlyBaseID:FBgn0032160 Length:281 Species:Drosophila melanogaster


Alignment Length:318 Identity:76/318 - (23%)
Similarity:122/318 - (38%) Gaps:87/318 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RLMSTNPAPVANKHLHTKVVN---GVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSA 99
            |:|||     |.| |.|..||   |:..:.::.|  .||.|..|:..:.:..|.::|:|.: ...
  Fly    17 RMMST-----ATK-LTTVEVNDKTGIATLTMNRP--PVNGLNLELLQDLKSSIDEIESNKS-RGL 72

  Fly   100 VLISGKPGCFVAGADI--------GMLEACQT-AEEATLISHGAQVMFDRMERSKKPIVAAISGV 155
            :|.|.....|.||.||        ..:.|..| .::..|..:|:.|          |..|||:|.
  Fly    73 ILTSSSSTIFSAGLDILEMYKPDKDRIRAFWTQLQDTWLALYGSSV----------PTAAAINGH 127

  Fly   156 CLGGGLELALACHYRIATKDSKTKLGLPEVMLGLLPGGGGTVRLPK--LTSVPTALDMELT---- 214
            ...||..||.:|.||:...:  ..:||.|..||::        .|:  :.|..:.|...:.    
  Fly   128 SPAGGCLLATSCEYRVMVPN--FTIGLNETQLGIV--------APQWFMASFLSVLPQRIAERAL 182

  Fly   215 --GKQVRADRAKRLGIVDLLVDPLGPGLQPAEQNTIEYLEKTAVQV-----ANDLASGKLRVNRE 272
              |:....:.|.::|::|           ....|..|.:||....:     .|.||..       
  Fly   183 NQGRMFTTEEALKVGLID-----------ETANNKEEAIEKCVAFIGTFAKVNPLARS------- 229

  Fly   273 KSGLVSKIQSFVMDTDFVKNKIFDTARKQVLKASNGLY----PAPLKILDVIRAGVDK 326
                ::|.|....|...::|     .||:.|:  ..|:    ||..|.|.:...|:.|
  Fly   230 ----LTKQQFRAADLQQLQN-----GRKEDLE--KFLFFVNQPAVQKGLGIYLEGLKK 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 76/318 (24%)
crotonase-like 52..235 CDD:119339 49/202 (24%)
3HCDH_N 375..553 CDD:280833
3HCDH 556..651 CDD:279114
3HCDH 689..768 CDD:279114
CG4598NP_001260304.1 crotonase-like 27..217 CDD:119339 52/223 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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