DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and Had1

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001285320.1 Gene:Had1 / 32592 FlyBaseID:FBgn0286508 Length:315 Species:Drosophila melanogaster


Alignment Length:281 Identity:70/281 - (24%)
Similarity:129/281 - (45%) Gaps:38/281 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 VGVLGAGLMGAGIVQVSVDKGYQVVMKDATEAGLARGIGQVQKGLE----TAVKRKRISALERDQ 436
            ||::|:||:|.....:....|||||:.|.....::..:...||.|:    ..:.|.:::|.   |
  Fly     8 VGIVGSGLIGRSWSMLFASVGYQVVLYDILPEQVSTALTATQKELQDLEAKGLLRGKLTAA---Q 69

  Fly   437 TLASLRPTLDYSDF-KNADIIIEAVFEDIKVKHRVIKELEAVVPEHCVIATNTSAIPITKIAAGS 500
            ..|.:..|.|..:. |.|..:.|.:.|.:.:|..:.|:|:|||..:.:::::||....:..:|..
  Fly    70 QFACISGTNDLKELVKGAIFVQECIPERLDLKKALYKQLDAVVGPNTILSSSTSTFLPSLFSADL 134

  Fly   501 SRPEKVVGMHYFSPVDKMQLLEIITHPGTSKDTIAQAVAVGLKQGKVVITVG-DGPGFYTTRILS 564
            .....|:..|..:|...:.|:||:..|.|..:.:.:..|:..:.|:..:|:. :..||...||..
  Fly   135 KNKANVLVSHPVNPPYYVPLVEIVPAPWTKPEWVKKTRALMEEIGQKPVTLSREIEGFALNRIQY 199

  Fly   565 TMLSEAIRLLQEGV-DPKDLDQYTK-----KFGF--PVGAATLADE---------------VGID 606
            .:|:|..||::.|: :.||:|....     ::.|  |:..|.|..|               |...
  Fly   200 AILNETWRLVEAGILNVKDIDSVMSNGLGPRYAFLGPLETAHLNAEGMANYFERYSNTIYAVSET 264

  Fly   607 VG------SHIAVDLAKAFGE 621
            :|      ..:||::||..||
  Fly   265 MGPTPKMEGPVAVEVAKQLGE 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 70/281 (25%)
crotonase-like 52..235 CDD:119339
3HCDH_N 375..553 CDD:280833 45/182 (25%)
3HCDH 556..651 CDD:279114 25/95 (26%)
3HCDH 689..768 CDD:279114
Had1NP_001285320.1 PRK06129 7..310 CDD:235706 70/281 (25%)
3HCDH_N 7..183 CDD:280833 44/177 (25%)
3HCDH 191..>265 CDD:279114 18/73 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454580
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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