DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and Hibch

DIOPT Version :10

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:XP_038939216.2 Gene:Hibch / 301384 RGDID:1308392 Length:404 Species:Rattus norvegicus


Alignment Length:308 Identity:83/308 - (26%)
Similarity:137/308 - (44%) Gaps:40/308 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RLMSTNPAPVANKHL----HTKVVNGVL-------VIKIDSPNAKVNSLGSEVSDEFERVIKDLE 91
            |..|...|.|..:||    ||:....:|       ||.::.|.. :|:|...:..:....:|..|
  Rat    31 RFSSIRRASVILQHLRMSKHTETAEVLLERRGCAGVITLNRPKL-LNALSLNMIRQIYPQLKKWE 94

  Fly    92 TNPAVNSAVLISGKPG-CFVAGADIGMLEACQTAEEATL---ISHGAQVMFDRMERSKKPIVAAI 152
            .:|. ...::|.|..| .|.||.||..|...:.|.: ||   :.....::.:.:...:||.||.|
  Rat    95 RDPD-TFLIIIKGAGGKAFCAGGDIKALSEAKKAGQ-TLSQDLFREEYILNNAIASCQKPYVALI 157

  Fly   153 SGVCLGGGLELALACHYRIATKDSKTKLGLPEVMLGLLPGGGGTVRLPKLTSVPTALDMELTGKQ 217
            .|:.:|||:.|::...:|:||:  ::...:||..:||.|..||...||:|.. .....:.|||.:
  Rat   158 DGITMGGGVGLSVHGQFRVATE--RSLFAMPETGIGLFPDVGGGYFLPRLQG-KLGYFLALTGFR 219

  Fly   218 VRADRAKRLGIVDLLVDPLGPGLQPAEQNTIEYLEKTAVQVANDLAS--GKLRVNREKSGL---- 276
            ::.....|.||....||  ...|...|:..:.....:|..||..|.|  .|.::.::||.:    
  Rat   220 LKGRDVHRAGIATHFVD--SEKLHVLEEELLALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEH 282

  Fly   277 VSKIQS-FVMDTDFVKNKIFDTARK-------QVLKASNGLYPAPLKI 316
            :.||.| |..:|   ..:|.:..|:       :.:|..|.:.|..|||
  Rat   283 MDKINSCFSANT---VEQILENLRQDGSPFAMEQIKVINKMSPTSLKI 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 83/308 (27%)
HibchXP_038939216.2 None

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