DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and Eci3

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_001009275.1 Gene:Eci3 / 291076 RGDID:1310224 Length:303 Species:Rattus norvegicus


Alignment Length:218 Identity:46/218 - (21%)
Similarity:94/218 - (43%) Gaps:19/218 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 NGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLI-SGKPGCFVAGADIG--MLE 119
            :|:..|..:.|:.| |::..::..:....:|:..|:   ||.:.: :|....:.:|.|:.  :.:
  Rat    58 DGITTITFNRPSKK-NAISFQMYKDIMLALKNASTD---NSVITVFTGVGDYYSSGNDLRNFIND 118

  Fly   120 ACQTAEEATLISHGAQVMFDRMERSKKPIVAAISGVCLGGGLELALACHYRIATKDSKTKLGLPE 184
            |.:..::.|:.:...:...:......||:||.::|..:|..:.| |.....:...|..| ...|.
  Rat   119 AGEIQDKVTMCAVLLREFVNTFIDFPKPLVAVVNGPAVGIAVTL-LGLFDAVYASDRAT-FHTPF 181

  Fly   185 VMLGLLPGGGGTVRLPKLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDPLGPGLQPAEQNTIE 249
            :.||..|....:...||:.....|.:|.|.||::.|..|...|:|          .:...::|.|
  Rat   182 IHLGQNPEACSSYTFPKMMGSAKAAEMLLFGKKLTAREAWAQGLV----------TEVFPESTFE 236

  Fly   250 YLEKTAVQVANDLASGKLRVNRE 272
            ....|.::....|:...:||.:|
  Rat   237 TEVWTRLKTYAKLSPNGMRVFKE 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 46/218 (21%)
crotonase-like 52..235 CDD:119339 39/179 (22%)
3HCDH_N 375..553 CDD:280833
3HCDH 556..651 CDD:279114
3HCDH 689..768 CDD:279114
Eci3NP_001009275.1 crotonase-like 46..301 CDD:304874 46/218 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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