DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and ech-9

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_501875.2 Gene:ech-9 / 184065 WormBaseID:WBGene00001158 Length:434 Species:Caenorhabditis elegans


Alignment Length:433 Identity:121/433 - (27%)
Similarity:200/433 - (46%) Gaps:59/433 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 VKTVGVLGAGLMG---------AGIVQVSVDKGYQVVMKDATEAGLARGIGQVQKGLETAVKR-- 426
            |.:|.::|.|.||         |||....|.:..| ..|...|...||         |.:.||  
 Worm    39 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ-RCKQELEVMYAR---------EKSFKRLN 93

  Fly   427 -KRISALERDQTLASLRPTLDYSDFKNADIIIEAVFEDIKVKHRVIKELEAVVPEHCVIATNTSA 490
             |||..:.     |:|:.|.|:....|.|:|:|:|.||:|:|..:...||.:....|:..||||:
 Worm    94 DKRIEKIN-----ANLKITSDFHKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSS 153

  Fly   491 IPITKIAAGSSRPEKVVGMHYFSPVDKMQLLEIITHPGTSKDTIAQAVAVGLKQGKVVITVGDGP 555
            :.:.:|::....|..:||:|:|:|.:.::|:|||....||...||.|........|:.:.||:..
 Worm   154 LDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCK 218

  Fly   556 GFYTTRILSTMLSEAIRLLQE-GVDPKDLDQYTKKFGFPVGAATLADEVGIDVGSHIAVDLAKAF 619
            .|...|:|.....::.:|:.| |..|..:|:....|||.:|..|:||..|.||...:..:     
 Worm   219 SFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITNFGFLMGPMTVADMNGFDVMEKLKKE----- 278

  Fly   620 GERFSGGNLE---VMNDLVLAGFLGRKSGKGIFLYDGQKRGTRPVNNDALEIVKQKYALVSKGAN 681
                  ..||   :..::......|||:.||.:.||.:.:  |..|:..:|.:.::   ||:.|.
 Worm   279 ------NGLEPNPIEKEMWRLKRYGRKTNKGFYKYDDKTQ--RKENDTEMEQIIRR---VSQNAK 332

  Fly   682 A------PEDLTLRMVSRFINEAVLCLEEKILDSPLEGDVGAVFGLGFPPFSGGPFRWVDQYGAG 740
            :      .:|:...|:...:||...|:||.::.:....|:..:.|.|:|..||||.|:....|..
 Worm   333 SNIQIINDQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLD 397

  Fly   741 KLVSKMQSYAELYGAPFKPAQTLLDMAKDPSKKFYPKTGSSKL 783
            |:.:.:..::.|  .|.:.|..:.|..|..:.|..    ||||
 Worm   398 KIANMLVHWSSL--EPKESAYIVADALKTANNKLM----SSKL 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 117/423 (28%)
crotonase-like 52..235 CDD:119339
3HCDH_N 375..553 CDD:280833 58/189 (31%)
3HCDH 556..651 CDD:279114 25/98 (26%)
3HCDH 689..768 CDD:279114 21/78 (27%)
ech-9NP_501875.2 FadB 38..317 CDD:224170 88/305 (29%)
3HCDH_N 41..217 CDD:280833 59/190 (31%)
3HCDH 220..307 CDD:279114 25/97 (26%)
3HCDH 343..>397 CDD:279114 16/53 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D134602at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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