DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and ech-5

DIOPT Version :9

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_499993.2 Gene:ech-5 / 176908 WormBaseID:WBGene00001154 Length:287 Species:Caenorhabditis elegans


Alignment Length:236 Identity:79/236 - (33%)
Similarity:125/236 - (52%) Gaps:22/236 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 STNPAPVANKHLHTKVVNGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGK 105
            :||||........|....|:.::.::.| ||.||||....|:|..|:.:|:.:|.....:|.|..
 Worm    23 TTNPANEVFIERLTGKDEGITILNMNRP-AKKNSLGRVFMDQFREVLDELKYDPKTRVVILNSKC 86

  Fly   106 PGCFVAGADIGMLEACQTAEEATLISHGAQVMFDRMERSKKPIVAAISGVCLGGGLELALACHYR 170
            ...|.:|||:...:. .:.:|||...:|.:..|..:||..:|::|||.|..|||||||||||..|
 Worm    87 DNVFCSGADLKERKT-MSQQEATRFVNGLRDSFTDVERLPQPVIAAIDGFALGGGLELALACDIR 150

  Fly   171 IATKDSKTKLGLPEVMLGLLPGGGGTVRLPKLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDP 235
            :|::  |.|:||.|....|:||.||:.||.::..|..|.::..|.:.:....|.:||:|:.:|: 
 Worm   151 VASQ--KAKMGLVETKWALIPGAGGSQRLYRIVGVAKAKELIYTAEVLNGADAAKLGVVNHVVE- 212

  Fly   236 LGPGLQPAEQNTIEYLEK------TAVQVANDLASGKLRVN 270
                ..|.|: ::|...|      .||::|      ||.:|
 Worm   213 ----ANPIEK-SLEIARKIIPRGPIAVKLA------KLAIN 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 79/236 (33%)
crotonase-like 52..235 CDD:119339 65/182 (36%)
3HCDH_N 375..553 CDD:280833
3HCDH 556..651 CDD:279114
3HCDH 689..768 CDD:279114
ech-5NP_499993.2 crotonase-like 39..287 CDD:304874 74/220 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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