DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtpalpha and ech-5

DIOPT Version :10

Sequence 1:NP_609299.1 Gene:Mtpalpha / 34276 FlyBaseID:FBgn0028479 Length:783 Species:Drosophila melanogaster
Sequence 2:NP_499993.2 Gene:ech-5 / 176908 WormBaseID:WBGene00001154 Length:287 Species:Caenorhabditis elegans


Alignment Length:236 Identity:79/236 - (33%)
Similarity:125/236 - (52%) Gaps:22/236 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 STNPAPVANKHLHTKVVNGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGK 105
            :||||........|....|:.::.::.| ||.||||....|:|..|:.:|:.:|.....:|.|..
 Worm    23 TTNPANEVFIERLTGKDEGITILNMNRP-AKKNSLGRVFMDQFREVLDELKYDPKTRVVILNSKC 86

  Fly   106 PGCFVAGADIGMLEACQTAEEATLISHGAQVMFDRMERSKKPIVAAISGVCLGGGLELALACHYR 170
            ...|.:|||:...:. .:.:|||...:|.:..|..:||..:|::|||.|..|||||||||||..|
 Worm    87 DNVFCSGADLKERKT-MSQQEATRFVNGLRDSFTDVERLPQPVIAAIDGFALGGGLELALACDIR 150

  Fly   171 IATKDSKTKLGLPEVMLGLLPGGGGTVRLPKLTSVPTALDMELTGKQVRADRAKRLGIVDLLVDP 235
            :|::  |.|:||.|....|:||.||:.||.::..|..|.::..|.:.:....|.:||:|:.:|: 
 Worm   151 VASQ--KAKMGLVETKWALIPGAGGSQRLYRIVGVAKAKELIYTAEVLNGADAAKLGVVNHVVE- 212

  Fly   236 LGPGLQPAEQNTIEYLEK------TAVQVANDLASGKLRVN 270
                ..|.|: ::|...|      .||::|      ||.:|
 Worm   213 ----ANPIEK-SLEIARKIIPRGPIAVKLA------KLAIN 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtpalphaNP_609299.1 fa_ox_alpha_mit 38..775 CDD:131494 79/236 (33%)
ech-5NP_499993.2 crotonase-like 39..287 CDD:474030 74/220 (34%)

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