DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brwl and jigr1

DIOPT Version :9

Sequence 1:NP_609298.1 Gene:brwl / 34275 FlyBaseID:FBgn0032130 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001097920.1 Gene:jigr1 / 43093 FlyBaseID:FBgn0039350 Length:336 Species:Drosophila melanogaster


Alignment Length:297 Identity:52/297 - (17%)
Similarity:96/297 - (32%) Gaps:79/297 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GSGTAGASIGSTNRVMQADEDFNIRFVNLVRTHKCLYDKKVPEYRNRDNQEKAWVLISKETRESV 100
            |.|...|:...|.       :|::..:...|:|..|||:....::::......|..|:.:.....
  Fly    15 GRGRPRATYAQTG-------EFDLGLIREYRSHPVLYDRSNKRFKDKLYVAHIWEQIAHKLGYDA 72

  Fly   101 IHCKERWRNLRACLSRY----IKQQSGSEPQHKPYYLTEHMAFLLPFLKSSRNSLEGNNSLATLY 161
            ...:||...||   :||    .:.::|...|...:.|.|.:.||                     
  Fly    73 TSIRERMTTLR---NRYNIEKRRVENGLSTQSSQWPLFESLQFL--------------------- 113

  Fly   162 QMSQQHLQHQPFLLHPALHATEEHKYCANTSINNNNNNNDVHNGESMEVLEMKYSISEKDDEETI 226
               ..|::.:....:.::...:|..|    .:::..::::.|.....:.||        ||.|..
  Fly   114 ---GDHIRPRRSFKNMSVKEEDEETY----EVDDCRSDSNGHMNSIKDELE--------DDSEIF 163

  Fly   227 DAFDP-AVTNTLG--MNRT-----SSTPTRSSALQGGGGNSPARSDTASADSMKNFIPDVQLAET 283
            |.... .||..||  :|.:     |...|......|.|.|..|.|......:...:|....:.. 
  Fly   164 DCEQALPVTTVLGIPLNNSDEANKSQRSTNGEMPNGKGYNHFAESYHRRHQNQPEYIISSPIVN- 227

  Fly   284 GSQLIYSDGGHGTPPPLHYHPHSHPHPLTLSMDHHPA 320
                           |:..:.....|     :|.||:
  Fly   228 ---------------PMRSNKRGSQH-----LDDHPS 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brwlNP_609298.1 MADF 60..145 CDD:214738 19/88 (22%)
BESS 356..389 CDD:281011
jigr1NP_001097920.1 MADF 33..118 CDD:214738 20/111 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438472
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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