DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brwl and CG6276

DIOPT Version :9

Sequence 1:NP_609298.1 Gene:brwl / 34275 FlyBaseID:FBgn0032130 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_650445.3 Gene:CG6276 / 41855 FlyBaseID:FBgn0038316 Length:470 Species:Drosophila melanogaster


Alignment Length:467 Identity:85/467 - (18%)
Similarity:144/467 - (30%) Gaps:160/467 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 RFVNLVRTHKCLYDKKVPEYRNRDNQEKAWVLISKETRESVIHCKERWRNLRACLSR-YIKQQSG 123
            :.:.:|:..:.:|:.:...|..|...|..|..:..:..::......:|.|||....| |......
  Fly    32 KLIEIVQRDEAIYNPRHKYYFCRPYVENFWREVDLKLEKNPGASLAKWTNLRISFRREYTNYLEE 96

  Fly   124 SEPQHKPYYLTEHMAFLLPFLKSSRNSLEGNNSLATLYQMSQQHLQH------------------ 170
            ..|....|:  :.|.||.|:|   |...:...||.|..|.:..||.:                  
  Fly    97 KVPPCWSYF--DRMFFLHPYL---RKKHQQPKSLDTQVQDALAHLSNLSSRMQRERSVTIPGSSS 156

  Fly   171 ---QPFLLHPALHATE--------------------------EHKYCANTSINNNNNNNDVHN-- 204
               ||   .|:.|.:.                          |.:...|:..:...:.||:.:  
  Fly   157 IGGQP---TPSAHQSPPAQQLDNYLDYFDEAEHNNSELDDIMEEEQQRNSRYHGQLDGNDIKSEC 218

  Fly   205 GESMEVLEMKYSISEKDDEETIDAFDPAVTNT--------------------------------- 236
            .|.::..|.:....|:|:::..|....|.|::                                 
  Fly   219 EEPVDDYEQEAHEPEEDEQDDQDLHKMAPTSSSSSAEAQRRYANQHSHASRMLPGRLQMRTYHDE 283

  Fly   237 -------------------LGMN---------------RTSSTP-----TRSSALQGGGGNSPAR 262
                               .|:|               .|.|.|     |.:.|..||||..|..
  Fly   284 MRGAIRPRSQELQAPTAAVAGVNYSAQPTAHPNISFVRPTFSKPVDLVSTTTHAGGGGGGGVPGT 348

  Fly   263 SDTASADSMKNFIPDVQLAETGSQLIYSDGGHGTPPPLHY---HPHSHPHPLTLSMDHHPASYEP 324
            :..:.|:     :|....|...:.:..|.....:....:.   |.|:|.|      ..||  ..|
  Fly   349 AGLSEAE-----LPTPSTAAVATPMAPSSSVSASSSSSYLSQRHGHNHMH------GGHP--QVP 400

  Fly   325 GSTKRIKTECEATSTMTNAGSIYGGLSSSEVADME------FFRSILPDLATLTPQQRRKFKIGI 383
            .|...::.|....|    .||:..|  .:|:.|.:      |..|:|||:..|..:.|.|.||..
  Fly   401 PSALPLRLEANNAS----GGSVSNG--GAELCDCKTDPDAMFLMSLLPDIQKLNGRDRGKIKIAF 459

  Fly   384 LELIDDVVTRYP 395
            ..::.|.:  ||
  Fly   460 QNILQDYL--YP 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brwlNP_609298.1 MADF 60..145 CDD:214738 18/85 (21%)
BESS 356..389 CDD:281011 11/38 (29%)
CG6276NP_650445.3 MADF 32..116 CDD:214738 19/88 (22%)
BESS 431..465 CDD:281011 10/33 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438527
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12243
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.