DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp30B and Slco1c1

DIOPT Version :9

Sequence 1:NP_609293.2 Gene:Oatp30B / 34268 FlyBaseID:FBgn0032123 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_067446.1 Gene:Slco1c1 / 58807 MGIID:1889679 Length:715 Species:Mus musculus


Alignment Length:824 Identity:243/824 - (29%)
Similarity:384/824 - (46%) Gaps:167/824 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LDHDSQPHATSYLAGDQLPSTVGSGPGGGGPSAVADSVTVKCHSRQASAGKCPADPEEDFDEEQF 148
            :|..|:.:|..:......|:        |||     |.||...|.: .|..|             
Mouse     1 MDTSSKENAHLFHKNSAQPA--------GGP-----SFTVGYPSTE-EARPC------------- 38

  Fly   149 RSGDCGILNCRPYGIQRFARIKIFVVLLSLLVMMQQALSSGYINSVITTIEKRFEIPSSYSGLIA 213
                ||             ::|:|:..|| .|...:||:.||:.|.:|.||:|||||||..|:|.
Mouse    39 ----CG-------------KLKVFLGALS-FVYFAKALAEGYLKSTVTQIERRFEIPSSLVGIID 85

  Fly   214 SSYEIGNVITVIFVSYLGSRRHIPVWIGIGAVIMGIGSLVFMVPHF---------------TGEP 263
            .|:||||::.:.||||.|::.|.|..||.|.::||.|:::..||.|               :...
Mouse    86 GSFEIGNLLVITFVSYFGAKLHRPKIIGAGCLVMGFGTMLIAVPQFFMEKYSYEKYERYSPSSNV 150

  Fly   264 NPGIAIVNKTSDNICKSALVRDQDMDLGRLSSGLSNQPLAPHTLREDNCLEGKASTTGPVLLFVL 328
            .|.|:.....|.:...|::       ||:..:.:|::           |: |.:|::..|.:| |
Mouse   151 TPSISPCYLESSSPSPSSI-------LGKSQNKISHE-----------CV-GDSSSSMWVYVF-L 195

  Fly   329 AQLLLGCGGSPLFTLGTTYVDDHVRTESSSMYIGFMYSMGAFGPVVGFLLGAYLLSFHMD--SLS 391
            ..||.|.|.:|:..||..|:||....::::.|||.:.::...||:.|||||:.....::|  .::
Mouse   196 GNLLRGLGETPIQPLGIAYLDDFASEDNAAFYIGCVQTVAIIGPIFGFLLGSLCAKLYVDIGFVN 260

  Fly   392 STTISITPGDRRWVGMWWGGFLLCGVILLVVAVPFFSFPKVLAR-----------EKKKIRKSSV 445
            ...|:|||.|.:|||.||.|:|:.|.:.|:.||||:..||.|.|           ||.|.....:
Mouse   261 LDHITITPKDPQWVGAWWLGYLIAGFLSLLAAVPFWCLPKTLPRSQSRENSGSTSEKSKFIDDPI 325

  Fly   446 VQPVLPNNSRATVATDEMGKVKKLEIVAVTSKEDQSQAPPKVDTGYGKDIKDIPQSMLRLVKNPV 510
            ...:.|.:.          |:|.:|:.                       ||...|:..|.:|||
Mouse   326 HYQMAPGDD----------KMKIMEMA-----------------------KDFLPSLKTLFRNPV 357

  Fly   511 YIVTCLGACMELMIVSGFVVFLPKYLETQFSLGKSQANIFTGSIAVPGACIGIFLGGCILKRFQL 575
            ||:....:.::...:.|.|.:.|||:|.|:....|:||...|.|.:|...:|||.||.::|:|:|
Mouse   358 YILYLCASTVQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVALGIFSGGIVMKKFRL 422

  Fly   576 KPKGAVQFVLITNVICLACYAMLFFLGCDNLKMAGTTIPYYTSNKHGSTLEQPFQVNLTAACNFG 640
            ....|.:..|.::|.....:..||.|||:|..:||.|:.|     .|:......:..|.:.||..
Mouse   423 GICEATKLYLGSSVFGYLLFLSLFALGCENSSVAGLTVSY-----QGTKPVSYHERALFSDCNSR 482

  Fly   641 CECLTSEVEPVCGNNGLTYFSPCHAGCTAFS-STSNTNYTNCACVR-ANISSSIYRGAGGSQAQA 703
            |:|..|:.||:||:||:||.|.|.|||.:.| |..|..::||.||. |...|..:.|..|...:.
Mouse   483 CKCSDSKWEPMCGDNGITYVSACLAGCQSSSRSGKNIIFSNCTCVGFAAPKSGNWSGMMGRCQKD 547

  Fly   704 LSANENFAEVTVVPVATAGPCATPCRTIYPFLILLFFMTFLVASTQMPLLMIVLRSVSEEERSFA 768
            ...::.|                    :| ||::....::.::...:|..:::||.:..:.:|||
Mouse   548 NGCSQMF--------------------LY-FLVISVITSYTLSLGGIPGYILLLRCIQPQLKSFA 591

  Fly   769 LGMQFVIFRLFGYIPAPILFGNLIDSTCILWK-SSCGEKGGRCLIYDIEKFRYKYVGL-----CA 827
            ||:..:..|:...||||:.||.|||::|:.|. ..||.:|. |.:||...||:.|:||     ..
Mouse   592 LGIYTLAVRVLAGIPAPVYFGVLIDTSCLKWGFKKCGSRGS-CRLYDSHAFRHIYLGLTTLLGTV 655

  Fly   828 SVKLIALVIFMVDWWLVRRRKQLEKMKPLNASDPIIGSIISLDK 871
            ||.|...|:|      |.::|.:.|...|..:...||...|:.|
Mouse   656 SVFLSMAVLF------VLKKKYVSKHSSLITTREKIGMSSSIKK 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp30BNP_609293.2 OATP 171..818 CDD:281175 209/677 (31%)
MFS 174..>433 CDD:119392 95/275 (35%)
MFS 512..>600 CDD:304372 26/87 (30%)
KAZAL_SLC21 633..684 CDD:238650 24/51 (47%)
Slco1c1NP_067446.1 OATP 44..641 CDD:281175 209/677 (31%)
MFS 46..>302 CDD:119392 95/276 (34%)
KAZAL_SLC21 475..528 CDD:238650 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X98
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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