DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp30B and slco5a1a

DIOPT Version :9

Sequence 1:NP_609293.2 Gene:Oatp30B / 34268 FlyBaseID:FBgn0032123 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_001340277.1 Gene:slco5a1a / 570033 ZFINID:ZDB-GENE-090316-1 Length:549 Species:Danio rerio


Alignment Length:627 Identity:216/627 - (34%)
Similarity:319/627 - (50%) Gaps:110/627 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 IGFMYSMGAFGPVVGFLLGAYLLSFHMDSLSSTTISITPGDRRWVGMWWGGFLLCGVILLVVAVP 425
            :..||.|||.||..|:|||..|:.|::|  ..|.::|..||.|:||.||.|||||.|.:|:|..|
Zfish     9 LAIMYVMGALGPAAGYLLGGILIGFYVD--PGTVVNIDQGDPRFVGNWWSGFLLCAVAMLLVIFP 71

  Fly   426 FFSFPKVLAREKKKIRKSSVVQPVLPNNSRATVATDEMGKVKKLEIVAVTSKEDQSQAPPKVDTG 490
            .|||||.|...:||.::.      :...:....:.|||.|.|.   .||:|           ..|
Zfish    72 MFSFPKKLPPRQKKSKRG------VKKGAGDVSSDDEMMKEKS---QAVSS-----------SMG 116

  Fly   491 YGKDIKDIPQSMLRLVKNPVYIVTCLGACMELMIVSGFVVFLPKYLETQFSLGKSQANIFTGSIA 555
            :||:|||:|::.:|::.|..::...|....|..||:.|:.|:||::|:||.:..|.|:|:||.|.
Zfish   117 FGKNIKDLPKAAVRILSNVTFLFVSLSYTAECAIVTAFITFIPKFIESQFGVPASSASIYTGLII 181

  Fly   556 VPGACIGIFLGGCILKRFQLKPKGAVQFVLITNVICLACYAMLFFLGCDNLKMAGTTIPYYTSNK 620
            ||.|.:||||||.|:|:.:|..:.|.:..:|.:.:.|.|::.||.:||:::.:.|..|||.|   
Zfish   182 VPSAGVGIFLGGYIIKKLKLGAREAAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTT--- 243

  Fly   621 HGSTLEQPFQVNLTAACNFGCECLTSEVEPVCGNNGLTYFSPCHAGCTAFSSTSN--TNYTNCAC 683
             |.||....: |||.:||..|.|...|..||||::|:|||:||.|||:..::.::  .||::|||
Zfish   244 -GPTLTLSHR-NLTGSCNVNCGCKIHEYAPVCGSDGITYFNPCLAGCSNIANHTSGIRNYSDCAC 306

  Fly   684 VRANISSSIYRGAGGSQAQAL-----SANENFAEVTVVPVATAGPCATPCRTIYPFLILLFFMTF 743
            |:   |..:...:||:....|     ..|||       ..|.||.|...|.|:..|||.||.:|.
Zfish   307 VQ---SRQVITPSGGNHELQLVIVKTYLNEN-------GFALAGKCERTCGTLITFLIFLFIVTL 361

  Fly   744 LVASTQMPLLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWKSSCGEKGG 808
            :.|..|..::::.||||.||:|.||||||||:.|...|||.||.||.:||:||:||:..||..|.
Zfish   362 ITACAQPSVIIVTLRSVDEEDRPFALGMQFVLLRTLAYIPTPIYFGAVIDTTCMLWQQDCGFHGS 426

  Fly   809 RCLIYDIEKFRYKYVGLCASVKLIALVIFMVDWWLVRRRKQLEKMKPLNASDPIIGSIISLDKLF 873
             |..||:...|:.|.||.||:|.:..:...:.|:.::||                          
Zfish   427 -CWEYDVTSLRFVYFGLAASLKFLGFLFIFLTWYSLKRR-------------------------- 464

  Fly   874 EEKLSGAEPSTAFVGGGGELIIPTDILRHSRNDSRTMHMDYCYDKCGRVVTPANTCNQPQTKSKK 938
            ||:                        .|:.....|:.   ..|....::..|.       ..|.
Zfish   465 EEQ------------------------THTHTHQHTLS---TLDTVSHLICHAG-------GHKG 495

  Fly   939 HFRSASCDVKMIKSFARDHSSSSGP---ADAAGQDAVGASTK 977
            |.|:.||.|.:.:.|  :||.::||   |.:.|....|...|
Zfish   496 HARTRSCPVFLPRPF--EHSHNAGPPGHALSRGNSCPGNGLK 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp30BNP_609293.2 OATP 171..818 CDD:281175 185/463 (40%)
MFS 174..>433 CDD:119392 37/71 (52%)
MFS 512..>600 CDD:304372 34/87 (39%)
KAZAL_SLC21 633..684 CDD:238650 24/52 (46%)
slco5a1aNP_001340277.1 OATP <9..435 CDD:308646 185/463 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 457 1.000 Domainoid score I476
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 483 1.000 Inparanoid score I1411
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D123298at33208
OrthoFinder 1 1.000 - - FOG0007263
OrthoInspector 1 1.000 - - oto40128
orthoMCL 1 0.900 - - OOG6_101062
Panther 1 1.100 - - LDO PTHR11388
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X98
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.870

Return to query results.
Submit another query.