DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp30B and slco1c1

DIOPT Version :9

Sequence 1:NP_609293.2 Gene:Oatp30B / 34268 FlyBaseID:FBgn0032123 Length:1197 Species:Drosophila melanogaster
Sequence 2:XP_005164528.1 Gene:slco1c1 / 562772 ZFINID:ZDB-GENE-041210-50 Length:710 Species:Danio rerio


Alignment Length:787 Identity:240/787 - (30%)
Similarity:377/787 - (47%) Gaps:143/787 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 KIFVVLLSLLVMMQQALSSGYINSVITTIEKRFEIPSSYSGLIASSYEIGNVITVIFVSYLGSRR 234
            |:|:|.|| .....:|||..|:.|.||.:|:||:|||...|:|..|:||||::.:.||||.|::.
Zfish    47 KMFLVALS-FAYFSKALSGSYMKSTITQLERRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKL 110

  Fly   235 HIPVWIGIGAVIMGIGSLVFMVPHF-----TGEPNPGIAIVNKTSDNICKSALVRDQDMDLGRLS 294
            |.|..|.||.::|.:|:.:..:|||     ..|.:..:::.:.:|.:.|.             ||
Zfish   111 HRPKIIAIGCLLMSLGTFLIALPHFIIGRYKFETSIRLSVNSSSSLSPCS-------------LS 162

  Fly   295 SGLSNQPLAPHTLREDNCLEGKASTTGPVLLFVLAQLLLGCGGSPLFTLGTTYVDDHVRTESSSM 359
            |...:....|.|    .| |.::..:..:.:| |..:|.|.|.:|:..||.:|:|||...|:::.
Zfish   163 SAEPSTSSVPST----GC-EHESRLSMWIYVF-LGNILRGIGETPVQPLGISYIDDHALEENAAF 221

  Fly   360 YIGFMYSMGAFGPVVGFLLGAYLLSFHMD--SLSSTTISITPGDRRWVGMWWGGFLLCGVILLVV 422
            |||.:.::...|||.|:|||:.....::|  .::..:|||||||.||||.||.|:|:.|.|.|:.
Zfish   222 YIGCVQTISVIGPVFGYLLGSVCAKIYVDIGFVNMESISITPGDARWVGAWWLGYLIAGFITLLS 286

  Fly   423 AVPFFSFPKVLAREKKKIRKSSVVQPVLPNNSRATVATDEMGKVKKLEIVAVTSKEDQSQAPPKV 487
            ||||:..||.|...::::.|.|        ..|.:...|.          |:...:.|:..|   
Zfish   287 AVPFWFLPKSLPLPERRLSKYS--------PERNSFIKDS----------ALLEHKYQADEP--- 330

  Fly   488 DTGYGKDIKDIPQSMLRLVKNPVYIVTCLGACMELMIVSGFVVFLPKYLETQFSLGKSQANIFTG 552
             ..:.:..||...::..|:.||||.:......::...:.|.|.:.|||:|..:....|:||...|
Zfish   331 -ANFLEMAKDFLPTLRSLLGNPVYFLYLCVTIIQFNSLIGMVTYKPKYIEQHYGQSASKANFLMG 394

  Fly   553 SIAVPGACIGIFLGGCILKRFQLKPKGAVQFVLITNVICLACYAMLFF--LGCDNLKMAGTTIPY 615
            .|.:|...:|:|.||.|:|:|:|...||.:|.|.|::  |..:..|||  :||:|..:||.|:.|
Zfish   395 VINIPAVALGMFSGGVIMKKFKLSIMGAAKFALGTSL--LGYFLSLFFFSMGCENASVAGITMSY 457

  Fly   616 YTSNKHGSTLEQPFQV--NLTAACNFGCECLTSEVEPVCGNNGLTYFSPCHAGC-TAFSSTSNTN 677
                 :|:  |..|..  :|.|:||..|.|.....:||||.:||||.|||.||| |:..|..:|.
Zfish   458 -----NGT--ESLFMADGSLRASCNAACHCPEKNWDPVCGEDGLTYVSPCLAGCRTSHGSGMDTV 515

  Fly   678 YTNCACVRANISSSIYRGAGGSQAQALSANENFAEVTVVPVATAGPC--ATPCRTIYPFLILLFF 740
            :..|:|:          |.|..                  .||||.|  ...|..|:|:.:.|..
Zfish   516 FEQCSCI----------GVGNQ------------------TATAGQCNNRESCHRIFPYFLALSV 552

  Fly   741 MT-FLVASTQMPLLMIVLRSVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILW-KSSC 803
            :| |:::....|..|:::|.:..:.:|.|||...:..|....|||||.||.:||:||:.| ...|
Zfish   553 ITSFIISLGGTPGYMLLIRCIKPQLKSLALGFHTLTTRTLAGIPAPIYFGAIIDTTCLKWGHKKC 617

  Fly   804 GEKGGRCLIYDIEKFRYKYVGLCASVKLIALVIFMVDWWLVRRRKQLEKMKPLNASDPIIGSIIS 868
            |.:|. |.||:...:|..|:||...::.::..:.::...::||..|.:                 
Zfish   618 GGRGA-CRIYNTAAYRIAYLGLTLGLRTVSFFLCILGLLVLRRHVQKQ----------------- 664

  Fly   869 LDKLFEEKLSGAEPSTAFVGG---GGELIIPTDILRHSRNDSRTMHMDYCYDKCGRVVTPANTCN 930
                        |.||...||   .|||    ..||...|:|           |.....|.||..
Zfish   665 ------------ERSTMVNGGSAAAGEL----QALRKEENNS-----------CNSEQCPQNTDY 702

  Fly   931 QPQTKSK 937
            .|:.:::
Zfish   703 DPERETR 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp30BNP_609293.2 OATP 171..818 CDD:281175 215/662 (32%)
MFS 174..>433 CDD:119392 96/265 (36%)
MFS 512..>600 CDD:304372 27/87 (31%)
KAZAL_SLC21 633..684 CDD:238650 24/51 (47%)
slco1c1XP_005164528.1 OATP 48..631 CDD:281175 215/662 (32%)
MFS 50..461 CDD:119392 148/461 (32%)
KAZAL_SLC21 470..523 CDD:238650 25/62 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X98
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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