DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oatp30B and Slco6d1

DIOPT Version :9

Sequence 1:NP_609293.2 Gene:Oatp30B / 34268 FlyBaseID:FBgn0032123 Length:1197 Species:Drosophila melanogaster
Sequence 2:XP_017452073.1 Gene:Slco6d1 / 367321 RGDID:1359388 Length:723 Species:Rattus norvegicus


Alignment Length:781 Identity:191/781 - (24%)
Similarity:311/781 - (39%) Gaps:178/781 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 PEEDFDEEQF----RSGDCG----ILNCRPYGIQRFARIKIFVVLLSLLVMMQQALSSGYINSVI 195
            |||.....||    ..|..|    :..|    :|||..|..|:....|..|     :.|.|..::
  Rat    50 PEEKMPHSQFSDSLEEGSFGLGPLVFPC----LQRFNNINCFLTAYFLGTM-----AHGMIFGLV 105

  Fly   196 TTIEKRFEIPSSYSGLIASSYEIGNVITVIFVS----YLGSRRHIPVWIGIGAVIMGIGSLVFMV 256
            ....|.:....|.|.|...:...|:.:....||    :.|.|.:...|:.....:.|:.|:||.:
  Rat   106 DQSLKVYVSELSPSKLETLTMGSGDDLAAFLVSLVGAHFGGRGNRVRWMVAACFVTGLASMVFAI 170

  Fly   257 PHFTGEPNPGIAIVNKTSDNICKSALVRDQDMDLGRLSSGLSNQPLAPHTLREDNCLEGKASTTG 321
            |.|..|    |..:...:|.:|..          |:.::.:..:.:.||   :..|         
  Rat   171 PFFNYE----IIKLGTVTDELCIE----------GKKTTKVCERTVIPH---KSTC--------- 209

  Fly   322 PVLLFVLAQLLLGCGGSPLFTLGTTYVDDHVRTESSSMYIGFMYSMGAFGPVVGFLLGAYLLSFH 386
             :..|...|.|.|..|.|.:.|..:::.|||.|.||.:|:....:..:.|.|:|:|:|.....|.
  Rat   210 -IAFFNFGQFLHGIAGMPFYLLAFSFIFDHVPTCSSGLYLAIADTALSVGYVLGYLVGIRNRMFP 273

  Fly   387 MDSLSSTTISITPGDRRWVG----------MWWGGFLLCGVILLVVAVPFFSFPKVLAREKKKIR 441
            :..           |.:.||          .||..:....|......:|...||..| |..::||
  Rat   274 VKE-----------DMKAVGHVQQFRILQRNWWRSYFAVAVFAFCTTLPLSCFPSRL-RGAQQIR 326

  Fly   442 KSSVVQPVLPNNSRATVATDEMGKVKKLEIVAVTSKEDQSQAPPKVDTGYGKD------IKDIPQ 500
            .                                    ::|:.||.:|... ||      :|.:..
  Rat   327 L------------------------------------EKSKEPPTIDRRL-KDKEIQPGLKGVLH 354

  Fly   501 SMLRLVKNPVYIVTCLGACMELMIVSGFVVFLPKYLETQFSLGKSQANIFTGSIAVPGACIGIFL 565
            ::..|::||:.:........:.:.:.....||||:|::.|.:..:.|:|.||...:|||.||.||
  Rat   355 AIWCLLRNPLVLTQTFCQVTKSLTLKSSGYFLPKFLQSHFLIVPTNASILTGMFVLPGALIGRFL 419

  Fly   566 GGCILKRFQLKPKGAVQFVLITNVICLACYAMLFFLGCDNLKMAGTTIPYYTSNKHGSTLEQPFQ 630
            ||.|:.|.|:..|..::|:::::.|.:..:.:.||..|:....||....|....|.|        
  Rat   420 GGYIVDRLQMSTKVVLKFMMVSSFISVVLFLLTFFWSCETAGFAGINDDYDGLGKLG-------- 476

  Fly   631 VNLTAACNFGCECLTSEVEPVCGNNGLTYFSPCHAGCTAFSSTSNTN-YTNCACVRANISSSIYR 694
             |.||.||..|.|..::...:||.:...|||.|.|||.|........ |.||:|::..::     
  Rat   477 -NFTAPCNEYCGCTMTDYSTICGRDEKQYFSACFAGCRASKPLRKEKAYYNCSCIKEGLT----- 535

  Fly   695 GAGGSQAQALSANENFAEVTVVPVATAGPCATPCRTIYPFLILLFFMTFLVAS-TQMPLLMIVLR 758
                    |...:..|.:      |.:|.|.|.|.|: |.|...:|...:.:: ..:|..||||:
  Rat   536 --------APDDDGQFFD------AVSGTCNTKCLTL-PLLFAFYFAATVFSNFCSVPSFMIVLK 585

  Fly   759 SVSEEERSFALGMQFVIFRLFGYIPAPILFGNLIDSTCILWK-SSCGEKGGRCLIYDIEKFRY-- 820
            ||.....|.:||:.:.|:|..|.:|..:||.:..|.||..|. :||||| |||.||:.:...:  
  Rat   586 SVPASWNSMSLGVTYTIWRFLGSVPDHLLFESTSDYTCNFWDINSCGEK-GRCWIYNKKNLLFTF 649

  Fly   821 -----KYV-------GLC-------------ASVKLIALV-IFMVDWWLVRRRKQLEKMKPLNAS 859
                 |::       |:|             .|..|:.|. |:..|:.:..:.|.|    |::..
  Rat   650 QSTSDKHIEDIKLNKGICDISARSQQGISMQISTGLLCLYGIYRHDYVVKEKNKSL----PIHVK 710

  Fly   860 D 860
            |
  Rat   711 D 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp30BNP_609293.2 OATP 171..818 CDD:281175 167/669 (25%)
MFS 174..>433 CDD:119392 57/272 (21%)
MFS 512..>600 CDD:304372 25/87 (29%)
KAZAL_SLC21 633..684 CDD:238650 19/51 (37%)
Slco6d1XP_017452073.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D123298at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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