DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oatp30B and Slco1a4

DIOPT Version :9

Sequence 1:NP_609293.2 Gene:Oatp30B / 34268 FlyBaseID:FBgn0032123 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_571981.1 Gene:Slco1a4 / 170698 RGDID:621389 Length:661 Species:Rattus norvegicus


Alignment Length:705 Identity:219/705 - (31%)
Similarity:345/705 - (48%) Gaps:142/705 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 YGIQRFARIKIFVVLLSLLVMMQQALSSGYINSVITTIEKRFEIPSSYSGLIASSYEIGNVITVI 225
            :|::.||:||:|::.|: ...:.::||..|:||::|.||::|.||:|..|||..|:||||::.:|
  Rat    11 HGVRCFAKIKMFLLALT-CAYVSKSLSGTYMNSMLTQIERQFGIPTSIVGLINGSFEIGNLLLII 74

  Fly   226 FVSYLGSRRHIPVWIGIGAVIMGIGSLVFMVPHFTGEPNPGIAIVNKTSDNICKSALVRDQDMDL 290
            ||||.|::.|.|:.||:|..:||:|..:..:|||                               
  Rat    75 FVSYFGTKLHRPIMIGVGCAVMGLGCFLISLPHF------------------------------- 108

  Fly   291 GRLSSGLSNQPLAPHTLREDN---CLEGKASTTGP--------------VLLFVL-AQLLLGCGG 337
              |......:.:.|.:....|   |:|.::.|..|              :.::|| ..::.|.|.
  Rat   109 --LMGQYEYETILPTSNVSSNSFFCVENRSQTLNPTQDPSECVKEMKSLMWIYVLVGNIIRGIGE 171

  Fly   338 SPLFTLGTTYVDDHVRTESSSMYIGFMYSMGAFGPVVGFLLGAYLLSFHMD--SLSSTTISITPG 400
            :|:..||.:|::|..::|:|.:|||.:.:....||::|.||.:...:.::|  |:::..::|||.
  Rat   172 TPIMPLGISYIEDFAKSENSPLYIGILETGMTIGPLIGLLLASSCANIYVDIESVNTDDLTITPT 236

  Fly   401 DRRWVGMWWGGFLLCGVILLVVAVPFFSFPKVLAREKKKIRKSSVVQPVLPNNSRATVATDEMGK 465
            |.||||.||.|||:|..:.::.:.|||.|||.|.:|.            |..|...|....|...
  Rat   237 DTRWVGAWWIGFLVCAGVNILTSFPFFFFPKTLPKEG------------LQENVDGTENAKEKKH 289

  Fly   466 VKKLEIVAVTSKEDQSQAPPKVDTGYGKDIKDIPQSMLRLVKNPVYIVTCLGACMELMIVSGFVV 530
            .||       :||::        .|..||.....:|   |..||:|::..|.:.::.........
  Rat   290 RKK-------AKEEK--------RGITKDFFVFMKS---LSCNPIYMLFILISVLQFNAFINSFT 336

  Fly   531 FLPKYLETQFSLGKSQANI--FTGSIAVPGACIGIFLGGCILKRFQLKPKGAVQFVLITNVICLA 593
            |:|||||.|:  |||.|.:  ..|...:|..|:|..:||.|:|:|::..|.|.....   .:||:
  Rat   337 FMPKYLEQQY--GKSTAEVVFLMGLYMLPPICLGYLIGGLIMKKFKVTVKKAAHLAF---WLCLS 396

  Fly   594 CYAMLFF---LGCDNLKMAGTTIPY-------YTSNKHGSTLEQPFQVNLTAACNFGCECLTSEV 648
            .|.:.|.   :.|||..:||.|..|       |..||            :.|.||..|.|.|:..
  Rat   397 EYLLSFLSYVMTCDNFPVAGLTTSYEGVQHQLYVENK------------VLADCNTRCNCSTNTW 449

  Fly   649 EPVCGNNGLTYFSPCHAGCTAFSST-SNTNYTNCACVRANISSSIYRGAGGSQAQALSANENFAE 712
            :||||:|||.|.|.|.|||.....| :|..:.||:|::::.:||                     
  Rat   450 DPVCGDNGLAYMSACLAGCEKSVGTGTNMVFQNCSCIQSSGNSS--------------------- 493

  Fly   713 VTVVPVATAGP-CATPCRTIYPFLILLFFMTFLVASTQMPLLMIVLRSVSEEERSFALGMQFVIF 776
             .|:.:...|| ||   ..:..|||:..|..|:.:...:|..|::||.:..||:|..:|:.....
  Rat   494 -AVLGLCNKGPDCA---NKLQYFLIIAIFGCFIYSLAGIPGYMVLLRCIKSEEKSLGVGLHAFCI 554

  Fly   777 RLFGYIPAPILFGNLIDSTCILWKS-SCGEKGGRCLIYDIEKFRYKYVGLCASVK 830
            |:...|||||.||.|||.||:.|.: .|||.|. |.:|||..||..|:||.|:::
  Rat   555 RILAGIPAPIYFGALIDRTCLHWGTLKCGEPGA-CRMYDINSFRRLYLGLPAALR 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp30BNP_609293.2 OATP 171..818 CDD:281175 208/681 (31%)
MFS 174..>433 CDD:119392 86/278 (31%)
MFS 512..>600 CDD:304372 26/89 (29%)
KAZAL_SLC21 633..684 CDD:238650 23/51 (45%)
Slco1a4NP_571981.1 oat 1..623 CDD:273279 219/705 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3626
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X98
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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