DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gdi and GDI2

DIOPT Version :9

Sequence 1:NP_001245953.1 Gene:Gdi / 34264 FlyBaseID:FBgn0004868 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_191551.1 Gene:GDI2 / 825162 AraportID:AT3G59920 Length:444 Species:Arabidopsis thaliana


Alignment Length:434 Identity:246/434 - (56%)
Similarity:318/434 - (73%) Gaps:3/434 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNEEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFQRY-GLEPPGER 64
            |:|||:.||||||||||||||:|||.|.||||:|||.||||||.|:. |.:|:::: |.|...|.
plant     1 MDEEYEVIVLGTGLKECILSGLLSVDGVKVLHMDRNDYYGGESTSLN-LNQLWKKFRGEEKAPEH 64

  Fly    65 FGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYKGGKIAKVPVDQKEALASD 129
            .|..||:|||::|||:|.||:||:.||||.||:||.||:::||||:..||:.|||....|||.|.
plant    65 LGASRDYNVDMMPKFMMGNGKLVRTLIHTDVTKYLSFKAVDGSYVFVKGKVQKVPATPMEALKSS 129

  Fly   130 LMGMFEKRRFRNFLIYVQDFREDDPKTWKDFDPTKANMQGLYDKFGLDKNTQDFTGHALALFRDD 194
            |||:|||||...|..:||::.|.||||....|.|:...:.|..|:|||.||.||.|||:||..:|
plant   130 LMGIFEKRRAGKFFSFVQEYDEKDPKTHDGMDLTRVTTKELIAKYGLDGNTIDFIGHAVALHTND 194

  Fly   195 EYLNEPAVNTIRRIKLYSDSLARY-GKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDKPIDEIV 258
            ::|::||.:|:.|:|||::||||: |.|||:||:||||||||.||||||:|||||||:||..::.
plant   195 QHLDQPAFDTVMRMKLYAESLARFQGTSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVE 259

  Fly   259 LGEGGKVVGVRSGEEVAKCKQVYCDPSYVPEKVRKRGKVIRCICILDHPVASTKDGLSTQIIIPQ 323
            ..|||||:||.|..|.||||::.|||||:|.||||.|:|.|.|.|:.||:.:|.|..|.|:||||
plant   260 FDEGGKVIGVTSEGETAKCKKIVCDPSYLPNKVRKIGRVARAIAIMSHPIPNTNDSHSVQVIIPQ 324

  Fly   324 KQVGRKSDIYVSLVSSTHQVAAKGWFVGMVSTTVETENPEVEIKPGLDLLEPIAQKFVTISDYLE 388
            ||:.||||:||...|.:|.||.||.|:..|||..||:||:.|:|||.|||.|:.:.|..:.|..|
plant   325 KQLARKSDMYVFCCSYSHNVAPKGKFIAFVSTDAETDNPQTELKPGTDLLGPVDEIFFDMYDRYE 389

  Fly   389 PIDDGSESQIFISESYDATTHFETTCLDVLNIFKRGTGETFDFS 432
            |:::......|||.|||||||||||..||||::...||:..|.|
plant   390 PVNEPELDNCFISTSYDATTHFETTVADVLNMYTLITGKQLDLS 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GdiNP_001245953.1 GDI 1..435 CDD:279353 246/434 (57%)
GDI2NP_191551.1 GDI 1..433 CDD:395792 245/432 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 500 1.000 Domainoid score I73
eggNOG 1 0.900 - - E1_COG5044
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37487
Inparanoid 1 1.050 502 1.000 Inparanoid score I314
OMA 1 1.010 - - QHG53557
OrthoDB 1 1.010 - - D763627at2759
OrthoFinder 1 1.000 - - FOG0001483
OrthoInspector 1 1.000 - - otm2918
orthoMCL 1 0.900 - - OOG6_100967
Panther 1 1.100 - - O PTHR11787
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X942
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

Return to query results.
Submit another query.