DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdi and Chm

DIOPT Version :10

Sequence 1:NP_523524.2 Gene:Gdi / 34264 FlyBaseID:FBgn0004868 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_058763.2 Gene:Chm / 24942 RGDID:2340 Length:650 Species:Rattus norvegicus


Alignment Length:555 Identity:128/555 - (23%)
Similarity:201/555 - (36%) Gaps:207/555 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT--------------------- 47
            ::|.||:||||.|.|::...|.||::|||:|...||||..||.:                     
  Rat     8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTEN 72

  Fly    48 --------------PLE---------ELF-----------QRYG--------------------- 57
                          ||.         |:|           :..|                     
  Rat    73 SMWQEQILENEEAIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAA 137

  Fly    58 --------LEP---------------PG----------ERFGR---------------------- 67
                    :||               ||          |..|:                      
  Rat   138 ETSCLPTAVEPLSMGSCEIPAEQSQCPGPESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQD 202

  Fly    68 ------------------GRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYKGGK 114
                              ||.:|:||:.|.|.:.|.|:.|||.:.|:||.|||:|.....::.|.
  Rat   203 NTETPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGT 267

  Fly   115 IAKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFREDDPKTWKDFDPTKANMQGLYDKFGLDKN 179
            :.:||..:.:...|..:.|.|||....||.:..:: |:.|..::.::.|..:......|  |..|
  Rat   268 VEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEY-EEHPDEYRAYEGTTFSEYLKTQK--LTPN 329

  Fly   180 TQDFTGHALALFRDDEYLNEPAVNTIRRIKLYSDSLARYGKSPYLYPMYGLGELPQGFARLSAIY 244
            .|.|..|::|:..:   .....|:.::..|.:...|.|||.:|:|:|:||.|||||.|.|:.|::
  Rat   330 LQYFVLHSIAMTSE---TTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVF 391

  Fly   245 GGTYMLDKPIDEIVLGEGGKVVGVRSGEEVAKCKQV-------------YCDPSYVPEKVRKR-- 294
            ||.|.|...:..:|:           .:|..|||.|             ..:.||:.|....|  
  Rat   392 GGIYCLRHSVQCLVV-----------DKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQ 445

  Fly   295 -GKVIRCICILDHPVASTKDGLSTQII-IPQKQVGRKSDIYVSLVSSTHQVAAKGWFVGMVS--- 354
             .::.|.:.|.|..|..|.......|: :|.::.|..:...:.|.||| ....||.::..::   
  Rat   446 YRQISRAVLITDGSVLKTDADQQVSILTVPAEEPGSFAVRVIELCSST-MTCMKGTYLVHLTCMS 509

  Fly   355 -------------------TTVETENPEVEIKPGL 370
                               |.:|.||.:|| ||.|
  Rat   510 SKTAREDLERVVQKLFTPYTEIEAENEQVE-KPRL 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GdiNP_523524.2 GDI 1..435 CDD:395792 128/555 (23%)
ChmNP_058763.2 Rossmann-fold NAD(P)(+)-binding proteins 6..530 CDD:473865 119/539 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..208 4/51 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..650
Blue background indicates that the domain is not in the aligned region.

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