DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gdi and CHM

DIOPT Version :9

Sequence 1:NP_001245953.1 Gene:Gdi / 34264 FlyBaseID:FBgn0004868 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_000381.1 Gene:CHM / 1121 HGNCID:1940 Length:653 Species:Homo sapiens


Alignment Length:558 Identity:125/558 - (22%)
Similarity:195/558 - (34%) Gaps:208/558 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASI---------------------- 46
            |:|.||:||||.|.|::...|.||::|||:|...||||..||.                      
Human     8 EFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENSDIVSDS 72

  Fly    47 ----------------------------------------------------------------- 46
                                                                             
Human    73 PVWQDQILENEEAIALSRKDKTIQHVEVFCYASQDLHEDVEEAGALQKNHALVTSANSTEAADSA 137

  Fly    47 --------------------TPL---EELFQRYGLEPPGER------------------------ 64
                                ||.   |...:..|.|..||:                        
Human   138 FLPTEDESLSTMSCEMLTEQTPSSDPENALEVNGAEVTGEKENHCDDKTCVPSTSAEDMSENVPI 202

  Fly    65 ------------------FGRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYK 111
                              ...||.:|:||:.|.|.:.|.|:.|||.:.|:||.|||:|.....::
Human   203 AEDTTEQPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFR 267

  Fly   112 GGKIAKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFREDDPKTWKDFDPTKANMQGLYDKFGL 176
            .|::.:||..:.:...|..:.|.|||....||.:..:: |..|..:|.::...     .|:....
Human   268 EGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCMEY-EKYPDEYKGYEEIT-----FYEYLKT 326

  Fly   177 DK---NTQDFTGHALALFRDDEYLNEPAVNTI---RRIKLYSDSLARYGKSPYLYPMYGLGELPQ 235
            .|   |.|....|::|:      .:|.|.:||   :..|.:...|.|||.:|:|:|:||.|||||
Human   327 QKLTPNLQYIVMHSIAM------TSETASSTIDGLKATKNFLHCLGRYGNTPFLFPLYGQGELPQ 385

  Fly   236 GFARLSAIYGGTYMLDKPIDEIVLGEGGKVVGVRSGEEVAKCKQV-------------YCDPSYV 287
            .|.|:.|::||.|.|...:..:|:           .:|..|||.:             ..:.||.
Human   386 CFCRMCAVFGGIYCLRHSVQCLVV-----------DKESRKCKAIIDQFGQRIISEHFLVEDSYF 439

  Fly   288 PEKVRKR---GKVIRCICILDHPVASTKDGLSTQII-IPQKQVGRKSDIYVSLVSSTHQVAAKGW 348
            ||.:..|   .::.|.:.|.|..|..|.......|: :|.::.|..:...:.|.|||.......:
Human   440 PENMCSRVQYRQISRAVLITDRSVLKTDSDQQISILTVPAEEPGTFAVRVIELCSSTMTCMKGTY 504

  Fly   349 FVGMVSTTVETENPEVEIKPGLDLLEPIAQK-FVTISD 385
            .|.:..|:.:|...:         ||.:.|| ||..::
Human   505 LVHLTCTSSKTARED---------LESVVQKLFVPYTE 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GdiNP_001245953.1 GDI 1..435 CDD:279353 125/558 (22%)
CHMNP_000381.1 NAD_binding_8 13..>54 CDD:290186 20/40 (50%)
NADB_Rossmann 225..542 CDD:304358 94/341 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 606..653
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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