DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdi and chm

DIOPT Version :9

Sequence 1:NP_001245953.1 Gene:Gdi / 34264 FlyBaseID:FBgn0004868 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_002938593.1 Gene:chm / 100488898 XenbaseID:XB-GENE-956389 Length:641 Species:Xenopus tropicalis


Alignment Length:524 Identity:127/524 - (24%)
Similarity:210/524 - (40%) Gaps:160/524 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT--------------------- 47
            |:|.::|||||.|.|::...:..|::|||||...||||..||.|                     
 Frog     8 EFDVVILGTGLPESIIAAACTRIGQRVLHIDARNYYGGNWASFTFSGLQTWIENCKQELNTELAA 72

  Fly    48 -------------PLEELFQR--------YGLEPPGERF-------------------------- 65
                         |..:..|.        |.....||..                          
 Frog    73 ACKGQALDNEEIIPFNKRNQTIQNIEVFCYSSTEDGEAVEEAGALNINSALLTTVTSSDGQENSS 137

  Fly    66 -----------------GR---------------------------------------------- 67
                             ||                                              
 Frog   138 IDISKNHTSTEQNDSPEGRSDLEEATNSDQRSADSTLETGTIVEVEPSLTQAIQQDSPKTITYSQ 202

  Fly    68 ----GRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSIEGSYVYKGGKIAKVPVDQKEALAS 128
                ||.:||||:.|||.:.|.|::|||.:.|:||.|||::.....|..|||.:||..:.:..||
 Frog   203 IVKEGRRFNVDLVSKFLYSRGLLIELLIKSNVSRYTEFKNVTRILTYHNGKIEQVPCSRADVFAS 267

  Fly   129 DLMGMFEKRRFRNFLIYVQDFREDDPKTWKDFDPTKANMQGLYDKFGLDKNTQDFTGHALALFRD 193
            ..:.|.|||....||::..|: |..|:.::|:: ....::.|..| .|....|.|..:::|:..:
 Frog   268 KQLSMVEKRILMKFLMHYIDY-ELHPEDYQDYE-NSTFLEFLKSK-QLTPTLQHFVLYSIAMVPE 329

  Fly   194 DEYLNEPAVNTIRRIKLYSDSLARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDKPIDEIV 258
                |...:..::.::.:...|.|||.:|:|:|||||||:||.|.|:.|::||.|.|...::.:|
 Frog   330 ----NAKTIEGLKAMQHFLRCLGRYGNTPFLFPMYGLGEIPQCFCRMCAVFGGVYCLHHSLECLV 390

  Fly   259 LGEGGK----VVGVRSGEEVAKCKQVYCDPSYVPEKVRKR---GKVIRCICILDHPVASTKDGLS 316
            :....|    |:..| |:.| .||.|..:.||:||::...   .::.|.:.|.|..:.:|:....
 Frog   391 VDGDSKLCKAVIDHR-GKRV-DCKYVIVEDSYLPEQICANVSYKQISRAVLITDCSILNTESNQE 453

  Fly   317 TQII-IPQKQVGRKSDIYVSLVSSTHQVAAKGWFVGMVSTTVETENPEVEIKPGLDLLEPIAQKF 380
            ..:: .|....|:.: :|::.:.|:.....|..:  :|..|..:..|..:     :.|||:.|:.
 Frog   454 ISVLTFPPADKGQTA-VYITELCSSTMTCMKNTY--LVHLTCSSTKPTAK-----EDLEPVVQQL 510

  Fly   381 VTIS 384
            .|:|
 Frog   511 FTLS 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GdiNP_001245953.1 GDI 1..435 CDD:279353 127/524 (24%)
chmXP_002938593.1 NADB_Rossmann 4..510 CDD:389744 125/518 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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