DRSC/TRiP Functional Genomics Resources

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Protein Alignment numb and numbl

DIOPT Version :9

Sequence 1:NP_001260291.1 Gene:numb / 34263 FlyBaseID:FBgn0002973 Length:556 Species:Drosophila melanogaster
Sequence 2:XP_005173435.1 Gene:numbl / 497616 ZFINID:ZDB-GENE-051113-340 Length:640 Species:Danio rerio


Alignment Length:654 Identity:239/654 - (36%)
Similarity:302/654 - (46%) Gaps:214/654 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DVKNGKSASFRFSKKSPKKMDRLRRSFRDSFRRRKDRVPESSKPHQWQADEEAVRSATCSFSVKY 87
            :.::|.:..|     ...:|::||:|.|   |::...|||:|:||||||||||||...|:|.|:|
Zfish     9 ETEDGSTREF-----ESVEMNKLRQSLR---RKKPTYVPEASRPHQWQADEEAVRKGKCNFPVRY 65

  Fly    88 LGCVEVFESRGMQVCEEALKVLRQSRRRPVRGLLHVSGDGLRVVDDETKGLIVDQTIEKVSFCAP 152
            ||.|||.|||||.|||||:|.|:.|.::.|:.:|.||.||||||||:||.|||||||||||||||
Zfish    66 LGLVEVDESRGMHVCEEAVKKLKVSGKKTVKAVLWVSADGLRVVDDKTKDLIVDQTIEKVSFCAP 130

  Fly   153 DRNHERGFSYICRDGTTRRWMCHGFLACKDSGERLSHAVGCAFAVCLERKQRRDKECGVTMTFDT 217
            |||:::.||||||||||||||||.|:|.||||||||||||||||.||||||||:||||||.:||.
Zfish   131 DRNYDKAFSYICRDGTTRRWMCHCFMALKDSGERLSHAVGCAFAACLERKQRREKECGVTASFDA 195

  Fly   218 KNSTFTRTGSFR-----QQTLTERLAMATVGTNERSVDG-----PGSAMP----GPPAATVKPFN 268
            ..::|.|.||||     ||:..|.: |..:...::.:.|     ||:|.|    |.|....:|..
Zfish   196 SRTSFVREGSFRVSSAAQQSDREDI-MKQIQDKKKEMCGISALPPGNASPPEGAGSPGERAEPGG 259

  Fly   269 PFAIERPHATPNMLERQSSFR----LSTIGSQSPFKRQMSLRINDLPSNADRQRAFLTAAAGNPM 329
            |.||.|.||....|.||.|||    ||.  ..||||||:|||:|||||...|:..|.|.      
Zfish   260 PHAIPRRHAPIEQLVRQGSFRGFPQLSQ--KNSPFKRQLSLRLNDLPSTLQRKTDFQTK------ 316

  Fly   330 QTPLRSVSPIAEVSPAKSAGADPLSAAAVAADSVSQLCQELSQGLSLLTQTDALLAAGEDL---N 391
                   :|:.|:.         |:.|. .|||::.||.:::...:         ...|||   .
Zfish   317 -------NPVPEMD---------LTVAG-EADSINALCSQINSSFT---------KPSEDLCAKT 355

  Fly   392 FNNNRSINQNIIAAEKQVQHVHSYAPPT--------------AQVTPRVASTTPTYQTLHSQSPS 442
            .||...|               |.|||.              .|:.|.|.|:.|..|..|.::||
Zfish   356 TNNCLPI---------------SCAPPAIPPPPAPPQATNLWVQIEPPVQSSPPIPQGGHKRTPS 405

  Fly   443 RSEQSIETSTELPNAEQWLGHVVRS------TSPAAPKRPT------------------------ 477
                         .||:||..|.::      |.|..|..||                        
Zfish   406 -------------EAERWLEEVAKAVKSQQQTPPTLPPPPTQQPPPVPTMPIAPGSLPTSMQPFP 457

  Fly   478 ---------------------------YLANVGRAQTL----------------------ASGTG 493
                                       |:..:..:.|.                      |:|||
Zfish   458 MAFDVTPAPVSMFTQQPLQPAFVPMQPYMPTLANSMTYPNASVPVVGITPSQMVANVFCSAAGTG 522

  Fly   494 AAVG---GGGPDDPFDAEWVANVAAAKQLS--PDLP--IPSTARSPLARHSTNPFISPPKA---P 548
            ..|.   |.||.        .......|.|  |.||  :|:|.           |.|||..   |
Zfish   523 GGVAIGVGMGPK--------TGTLGGSQHSAFPTLPGGLPTTT-----------FASPPTINGHP 568

  Fly   549 AQSF 552
            ..||
Zfish   569 QNSF 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
numbNP_001260291.1 PTB_Numb 67..201 CDD:241298 101/133 (76%)
NumbF 269..374 CDD:283874 40/108 (37%)
numblXP_005173435.1 PTB_Numb 45..179 CDD:241298 101/133 (76%)
NumbF 260..344 CDD:283874 40/108 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574044
Domainoid 1 1.000 197 1.000 Domainoid score I3063
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 335 1.000 Inparanoid score I2385
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1110016at2759
OrthoFinder 1 1.000 - - FOG0003748
OrthoInspector 1 1.000 - - otm25571
orthoMCL 1 0.900 - - OOG6_108078
Panther 1 1.100 - - O PTHR11232
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2613
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.900

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