DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment numb and dab2

DIOPT Version :9

Sequence 1:NP_001260291.1 Gene:numb / 34263 FlyBaseID:FBgn0002973 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001314800.1 Gene:dab2 / 404040 ZFINID:ZDB-GENE-040303-1 Length:797 Species:Danio rerio


Alignment Length:651 Identity:127/651 - (19%)
Similarity:213/651 - (32%) Gaps:214/651 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RDSFRRRKDRVPESSKPH---QWQADEEAVRSATCSFSVKYLGCVEVFESRGMQVCEEALKVL-- 109
            |.||.:.:.::||.:...   ::|.|  .||     :..|.:|..:|.::||.::|::::..|  
Zfish    35 RTSFWKERRKIPEKTDEFLLARFQGD--GVR-----YKAKLIGVDDVQDARGDKMCQDSMMKLKG 92

  Fly   110 -----RQSRRRPVRGLLHVSGDGLRVVDDETKGLIVDQTIEKVSFCAPDRNHERGFSYIC-RDGT 168
                 |...:...|..:::|..|:::||::|..:..:..:.|:||.|.|....|.|.|:| .:|.
Zfish    93 MAIAARSQGKHKQRIWINISLTGIKIVDEKTGVIEHEHVVNKISFIARDVTDNRAFGYVCGAEGQ 157

  Fly   169 TRRWMCHGFLACK--DSGERLSHAVGCAFAVCLERKQRRDKECGVTMTFDTKNSTFTRTGSFRQQ 231
                  |.|.|.|  ...|.|...:...|.:....| ::::|.|     .......|..|..   
Zfish   158 ------HQFFAIKTAQQAEPLVIDLKDLFQLIFNMK-KKEQEAG-----QKGEGNGTENGGD--- 207

  Fly   232 TLTERLAMATVGTNERSV------------------------------------------DGPGS 254
                  |:..|..||..|                                          |.|..
Zfish   208 ------ALLAVDGNENPVKSVEQMNLFGDMSTPPDIHSPTPDSVLLLELSDLFDGNQVNQDNPFI 266

  Fly   255 AMPGP-----------------PAATVKPF--NPFA----------------------IERPHAT 278
            ..|.|                 |..:..||  :||:                      :..|.::
Zfish   267 TNPSPLCNKPFDKSASSTSDLFPTLSSDPFSDDPFSPLNDQSDSVFSSNNESDFSSFLLNGPDSS 331

  Fly   279 PNMLERQSSFRL---STIGSQSPFKRQMSLRINDLPSNAD---RQRAFLTAAAGNP--------- 328
            .:...:...|..   |.:.::||..:...|.|:||....:   .|..||:.:..||         
Zfish   332 EDPSPKSQQFNKLFDSQLSNESPNNQVQQLPISDLNGGTNSIFSQNPFLSISLNNPPIVNGLYSS 396

  Fly   329 ----MQTPLRSVS----PIAEVSPAKSAGADPLSAAAVAADSVSQLC---QELSQGLSLL-TQTD 381
                :|.||.:.|    .:.:.:|:.:.....|:|......::...|   :|.|.|..|. :...
Zfish   397 DPPVLQAPLCNGSNKQLALFQTNPSTTVQNGGLTALCPPPQNLKPRCARRREKSPGNDLFGSGLF 461

  Fly   382 ALLAAGEDLNFNNNRSINQNII--AAEKQVQHVHS----YAPPTAQVTPRVASTTPTYQTLHSQS 440
            |..|..|....|.|.||..::.  .....:....|    :||.||.|:             ..|:
Zfish   462 APPAQNESQASNQNASIPADLFNSTPSSTINAFGSMSLGHAPGTAPVS-------------WGQT 513

  Fly   441 PSRSEQSIETSTELP---------------NAEQWLGHVVRSTSPAAPKRPTYLANVGRAQTLAS 490
            |:...........:|               :|..| |.  :..||..|.          |.|.|.
Zfish   514 PTMFPPQAGVQVTIPGPPRPFPQPSAFGGLSAPAW-GQ--QGASPFGPP----------AGTQAW 565

  Fly   491 G-TGAAVGGG-----GPDDPFDAEWVANVAAAKQLSPDLPIPSTARSPLARHSTNPFISPPKAPA 549
            | .|||...|     ||        ||:.....|.:|  .:|..|...:.:.:..|...||:.|.
Zfish   566 GQPGAAAPVGTWPAPGP--------VASPFQPNQFAP--MMPPNAMMGMQQGAVAPPRPPPRPPV 620

  Fly   550 Q 550
            :
Zfish   621 K 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
numbNP_001260291.1 PTB_Numb 67..201 CDD:241298 35/146 (24%)
NumbF 269..374 CDD:283874 26/152 (17%)
dab2NP_001314800.1 PTB_Dab 47..196 CDD:269926 39/167 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574053
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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