DRSC/TRiP Functional Genomics Resources

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Protein Alignment numb and Fam43b

DIOPT Version :9

Sequence 1:NP_001260291.1 Gene:numb / 34263 FlyBaseID:FBgn0002973 Length:556 Species:Drosophila melanogaster
Sequence 2:XP_006239356.1 Gene:Fam43b / 313650 RGDID:1560959 Length:330 Species:Rattus norvegicus


Alignment Length:273 Identity:55/273 - (20%)
Similarity:95/273 - (34%) Gaps:80/273 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 MDRLRRSFRDSFRRRKDRVPESSKPHQWQADEEAVRSATCSFSVKYLGCVEVFESRGMQVCEEAL 106
            ::||.|.||.  ||:|..:.:...                :::|.|||......::|....::|:
  Rat    49 LERLGRVFRS--RRQKVELNKEDP----------------TYTVWYLGNAVTLHAKGDGCTDDAV 95

  Fly   107 KVLRQSRRRPVRGL---LHVSGDGLRVVDDET-------KGLIVDQTIEKVSFCAPDRNHERGFS 161
            ..: .:|..|..|.   |.:...|:|:...|.       :.......:.::::||.|..|.|.|:
  Rat    96 GRI-WARCGPGGGTKMKLTLGPHGIRMQPSERGSGGSGGRRPAHAYLLPRITYCAADGRHPRVFT 159

  Fly   162 YICRDGTTRRWM---CHGFLACK----DSGERLSHAVGCAFAVCLERKQRRDKECGVTMTFDTKN 219
            ::.|.....:.:   ||..|..:    .|..||.|....|.....:|.||:.         |.::
  Rat   160 WVYRHQARHKAVVLRCHAVLLARAHKARSLARLLHQTALAAFSDFKRLQRQS---------DARH 215

  Fly   220 STFTRTGSFRQQTLTERLAMATVGTNERSVDGPGSAMPGPPAATVK----PFNPFAIERPHATPN 280
                    .|||.|              ...|..:::|..|...:.    .:.|...||....| 
  Rat   216 --------VRQQHL--------------RAGGAAASVPRAPLRRLLNAKCAYRPPPGERSRGAP- 257

  Fly   281 MLERQSSFRLSTI 293
                    |||:|
  Rat   258 --------RLSSI 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
numbNP_001260291.1 PTB_Numb 67..201 CDD:241298 28/150 (19%)
NumbF 269..374 CDD:283874 8/25 (32%)
Fam43bXP_006239356.1 PH-like 71..262 CDD:418428 46/231 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334816
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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