DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment numb and Fam43a

DIOPT Version :9

Sequence 1:NP_001260291.1 Gene:numb / 34263 FlyBaseID:FBgn0002973 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_808300.1 Gene:Fam43a / 224093 MGIID:2676309 Length:424 Species:Mus musculus


Alignment Length:509 Identity:102/509 - (20%)
Similarity:165/509 - (32%) Gaps:180/509 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GKSASFRFSKKS------PK-KMDRLRRSFRDSFRRRKDRVPESSKPHQWQADEEAVRSATCSFS 84
            |.:.|..:|..|      |: .:.|:...||.   :||       |.|        :.|...:::
Mouse    25 GYAVSLHYSALSSLARACPEGALSRVGSMFRS---KRK-------KLH--------ITSEDPTYT 71

  Fly    85 VKYLGCVEVFESRGMQVCEEAL-KVLRQSR--RRPVRGLLHVSGDGLRVVDDETKGLIVD---QT 143
            |.|||.....::||....:.|: |:..:|.  |:..:..|.||..|:|:|..|.:.|...   ..
Mouse    72 VLYLGNATTIQARGDGCTDLAVGKIWSKSEAGRQGTKMKLTVSAQGIRMVHAEERALRRPGHLYL 136

  Fly   144 IEKVSFCAPDRNHERGFSYICRDGTTRRWM---CHGFLACKDSGERLSHAVGCAFAVCL------ 199
            :.:|::|..|....:.|:::.|.....:.:   ||..|..|....:       |.|:.|      
Mouse   137 LHRVTYCVADARLPKVFAWVYRHELKHKAVMLRCHAVLVSKPEKAQ-------AMALLLYQTSAN 194

  Fly   200 -----ERKQRRDKECGVTMTFDTKNSTFTRTGSFRQQTLTERLAMATVGTNERSVDGPGSAMPGP 259
                 :|.:|||         |.::         :||.|.....:..|...:..:.||       
Mouse   195 ALAEFKRLKRRD---------DARH---------QQQELVGAHTIPLVPLRKLLLHGP------- 234

  Fly   260 PAATVKPFNPFAIERPHATPNM---------------LERQSSFRLST----------IGSQSPF 299
              ...||    .:||..:.|.:               |:.:....|..          :|...|.
Mouse   235 --CCYKP----PVERSRSAPKLGSITEDLLGEQQEEELQEEEEEHLEDCLEEEEEEDGVGDGDPA 293

  Fly   300 KRQMSLRINDLPSNADRQRAFLTAA------AGNPMQTPLRSVSPIAEVSPAKSAGAD-PLSAAA 357
            :.:           |:.|||.:.|.      ..:|::...........||...|:|.. |||.. 
Mouse   294 EEE-----------AEAQRALVVAMQLECEDLLDPLENGHEEALGDGGVSLGPSSGTSLPLSVC- 346

  Fly   358 VAADSVSQLCQELSQGLSLLTQTDALLAAGEDLNFNNNRSINQNIIAAEKQVQHVHSYAPPTAQV 422
             |:|..:||.|              |::...||:|.|:.|                     |.:.
Mouse   347 -ASDMKAQLSQ--------------LISDLGDLSFGNDVS---------------------TLET 375

  Fly   423 TPRVASTTPTYQTLHSQSPSRSEQSIETSTELPNAEQWLGHVVRSTSPAAPKRP 476
            ..||.       .|.|...:.||.|||..          |......||..|..|
Mouse   376 DLRVT-------RLLSGESTGSESSIEGG----------GLDATPVSPGNPSGP 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
numbNP_001260291.1 PTB_Numb 67..201 CDD:241298 32/153 (21%)
NumbF 269..374 CDD:283874 25/136 (18%)
Fam43aNP_808300.1 PID_2 69..256 CDD:258856 46/224 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..299 5/48 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..424 12/41 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831107
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.