DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment numb and numb

DIOPT Version :10

Sequence 1:NP_523523.2 Gene:numb / 34263 FlyBaseID:FBgn0002973 Length:556 Species:Drosophila melanogaster
Sequence 2:XP_012823284.1 Gene:numb / 100038147 XenbaseID:XB-GENE-854791 Length:654 Species:Xenopus tropicalis


Alignment Length:631 Identity:230/631 - (36%)
Similarity:300/631 - (47%) Gaps:176/631 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 MDRLRRSFRDSFRRRKD-RVPESSKPHQWQADEEAVRSATCSFSVKYLGCVEVFESRGMQVCEEA 105
            |::||:    ||||:|| .|||:|:|||||.|||:||:..|||.|||||.|||.|||||.:||||
 Frog     1 MNKLRQ----SFRRKKDIYVPEASRPHQWQTDEESVRNGKCSFQVKYLGHVEVEESRGMHICEEA 61

  Fly   106 LKVLRQSR-----------RRPVRGLLHVSGDGLRVVDDETKGLIVDQTIEKVSFCAPDRNHERG 159
            :|.|:..|           ::.::.:|.||.|||||||::||.|:||||||||||||||||.:|.
 Frog    62 VKRLKSERKYFKGFFAKSGKKAIKAVLWVSADGLRVVDEKTKDLLVDQTIEKVSFCAPDRNFDRA 126

  Fly   160 FSYICRDGTTRRWMCHGFLACKDSGERLSHAVGCAFAVCLERKQRRDKECGVTMTFDTKNSTFTR 224
            |||||||||||||:||.|:|.||:|||||||||||||.||||||:|:||||||.|||...:||||
 Frog   127 FSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 191

  Fly   225 TGSFRQQTLTERL----AMATVGTNERSVDGPGSAMPGPPAATV--------------------- 264
            .||||..|.||:.    .|..:..:.:.::.....:|..|:.||                     
 Frog   192 EGSFRVTTATEQAEREEVMKQIQESRKELEVKAPVVPAAPSTTVSSTPTPVLQSSPTSEVFVVQD 256

  Fly   265 -KPFN-PFAIERPHATPNMLERQSSFRLSTIGSQ--SPFKRQMSLRINDLPSNADRQRAFLTAAA 325
             |..| |.||.|.||....|.||.|||.....||  ||||||:|||||:|||...|:..|     
 Frog   257 SKDLNYPHAIPRRHAPVEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTVQRKSDF----- 316

  Fly   326 GNPMQTPLRSVSPIAEVSPAKSAGADPLSAAAVAADSVSQLCQELSQGLSL--------LTQTDA 382
                    ::.:|:||:....              ||:|.||.:::...|:        ...|.|
 Frog   317 --------QATNPVAEMEGEN--------------DSISALCSQITNTFSMPPEDPFTSAPMTKA 359

  Fly   383 LLAAGEDLNFNNNRSINQNIIAAEKQVQHVHSYAPPTAQVTP----RVASTTP------------ 431
            ..........|...|......|....:....:.|.|..:..|    ..||..|            
 Frog   360 TTPQSPPFEVNGTASAFSLPAATPTPISVTSTAAAPVRETNPWANAPAASNLPVTTTGTLSVAPL 424

  Fly   432 --------TYQTLHSQSPSRSEQSIETSTELPNAEQWLGHVVR------STSPAAPKRP------ 476
                    |:|:.|.::||             .|::||..|.:      |..||.|.:|      
 Frog   425 VGPVPSSGTHQSNHKRTPS-------------EADRWLEEVSKTIMQRQSPVPAVPTQPMVQPAL 476

  Fly   477 -------TYLAN----------------------VGRAQTLASG-----TGAAVGGGGPDDPFDA 507
                   .||||                      |....::|:|     :...|.|..|     :
 Frog   477 AAPQPNQPYLANAYVTSQSMPVSVVPGLHPPFMPVQPPYSVANGMSYPASSVPVVGITP-----S 536

  Fly   508 EWVANV--AAAKQLSPDLPIPSTARS------PLARHSTNPFISPP 545
            :.||||  .|:.|:....|.|:.|..      ..:..|::||..||
 Frog   537 QMVANVFGVASPQVFQPKPSPNLATQQTYPTYEASSASSSPFYKPP 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
numbNP_523523.2 PTB_Numb 67..201 CDD:241298 96/144 (67%)
NumbF 269..374 CDD:461874 38/106 (36%)
numbXP_012823284.1 PTB_Numb 23..168 CDD:241298 104/155 (67%)
Atrophin-1 <224..>580 CDD:460830 90/370 (24%)
NumbF 263..343 CDD:461874 21/87 (24%)

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