DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbp2 and AT5G06060

DIOPT Version :10

Sequence 1:NP_523522.1 Gene:Fbp2 / 34259 FlyBaseID:FBgn0000640 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_196225.1 Gene:AT5G06060 / 830493 AraportID:AT5G06060 Length:264 Species:Arabidopsis thaliana


Alignment Length:226 Identity:46/226 - (20%)
Similarity:83/226 - (36%) Gaps:41/226 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WT--GKNVVYVGSFSGIGWQMMMQLMQKDIKMMGIMHRMENVKMMK---KLQAINPSVKVVFMQM 63
            |:  ||..:..|...|||..::.:|.:...|:.......|.:....   |...:..|..|....:
plant     7 WSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGSVCDASV 71

  Fly    64 NLMEKMSIEQAMKKMGQMMGHIDVMINGEGVLLDK--------DVETTMGMNLTGMIQSTMMAMP 120
            ....:..|::|.....   |.::::||..|..:.|        :....|..||......:.:|.|
plant    72 RDQREKLIQEASSAFS---GKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAFHLSQIAHP 133

  Fly   121 YMDKTQMGMGGMVVNMSSVYGLEPAPAFSVYAAAMHGILGFTRSMGDKMIYQKTGVMFMAMCPGL 185
            .:..:.:   |.:|.:|||.||....:.|:|.|....:...||::.               |...
plant   134 LLKASGV---GSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLA---------------CEWA 180

  Fly   186 TNSEMIMNLRDN--VTWHHSESMVEAIESAK 214
            ::     |:|.|  ..|:...|:||.:...|
plant   181 SD-----NIRTNCVAPWYIKTSLVETLLEKK 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbp2NP_523522.1 ADH_SDR_c_like 7..249 CDD:187584 44/221 (20%)
AT5G06060NP_196225.1 TR_SDR_c 6..256 CDD:187590 46/226 (20%)

Return to query results.
Submit another query.