DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fbp2 and Pdh

DIOPT Version :10

Sequence 1:NP_523522.1 Gene:Fbp2 / 34259 FlyBaseID:FBgn0000640 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster


Alignment Length:246 Identity:82/246 - (33%)
Similarity:145/246 - (58%) Gaps:4/246 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GKNVVYVGSFSGIGWQMMMQLMQKDIKMMGIMHRMENVKMMKKLQAINPSVKVVFMQMNLMEKMS 70
            |||.|..|...|||.|:..||:......:.|:...:|::...||:|.:|:..|:.::|::..|..
  Fly    22 GKNAVVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAAHPTQSVMIIKMDVANKKG 86

  Fly    71 IEQAMKKMGQMMGHIDVMINGEGVLLDKDVETTMGMNLTGMIQSTMMAMPYMDKTQMGMGGMVVN 135
            :|...:::.:..|:||:::|..|:..||||:.|:.:||.|:|.||:.|:|||.|...|.||:|||
  Fly    87 VEATYEEIAKTFGNIDIVVNVAGIFNDKDVQRTLLVNLGGIINSTLSALPYMGKDNGGKGGIVVN 151

  Fly   136 MSSVYGLEPAPAFSVYAAAMHGILGFTRSMGDKMIYQKTGVMFMAMCPGLTNSEMIMNLRDNVTW 200
            ||||.||:|.....||.|...||:.|||.:.::..||::|:.|:.:|||.|.::|..|..:.:.:
  Fly   152 MSSVVGLDPMFIIPVYGATKAGIINFTRCLANEKYYQRSGIKFVTVCPGATMTDMFTNFTEKIIF 216

  Fly   201 -HHSESMVEAIESAKRQMPEEAAMQMIHAMEMMKNGSMWIVSMGQLKEVTP 250
             ..|:.....::...:|...:.:..:::.:|..|||:::::   :.|.|.|
  Fly   217 PETSDETYRILDRLNKQSAADVSRCILNVLEKDKNGAVYVI---EGKRVYP 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbp2NP_523522.1 ADH_SDR_c_like 7..249 CDD:187584 79/242 (33%)
PdhNP_524105.2 Rossmann-fold NAD(P)(+)-binding proteins 23..259 CDD:473865 78/238 (33%)

Return to query results.
Submit another query.