DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco1 and LAC1

DIOPT Version :10

Sequence 1:NP_609287.3 Gene:Mco1 / 34258 FlyBaseID:FBgn0032116 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_173252.2 Gene:LAC1 / 838393 AraportID:AT1G18140 Length:581 Species:Arabidopsis thaliana


Alignment Length:680 Identity:170/680 - (25%)
Similarity:264/680 - (38%) Gaps:158/680 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 TCRYKFVVEWYQTFSKACYDCPRNLTDCSRPHCVMGDGLERSITVVNRMMPGPAIEVCEGDEIVV 321
            |.|:.|.||| :..::.|:                    .:.:..||...|||.:.|.|||.:.:
plant    28 TRRFHFNVEW-KKVTRLCH--------------------TKQLLTVNGQYPGPTVAVHEGDIVEI 71

  Fly   322 DVKNHLLGESTSIHWHGLHQKKTPYMDGVPHITQCPITPHATFRYSFPA-DLSGTHFWHSHTGMQ 385
            .|.|. :..:|:||||||.|.:|.:.||..:||||||....::.|.|.. |..||..||:|...|
plant    72 KVTNR-IAHNTTIHWHGLRQYRTGWADGPAYITQCPIRSKQSYTYRFKVEDQRGTLLWHAHHSWQ 135

  Fly   386 RGDGVFGALIIRKPKTAEPHGGLYDFDLSEHVMIVQDWIHDTGASIFSYHHHSRGDNKPHNLLVN 450
            |. .|:||.|| .|:...|..|.:  ..||..:|:.:|.:|.            .||....::..
plant   136 RA-SVYGAFII-YPRQPYPFSGSH--IQSEIPIILGEWWNDD------------VDNVEKAMMKT 184

  Fly   451 GKGRYYNRIWAEAKQAHRRAEERTTQPVEPLPKSQVDFVQTLPRQARLAKTNTTKLFPVNSRQKR 515
            |.|       |:...|:                                                
plant   185 GAG-------AKVSDAY------------------------------------------------ 194

  Fly   516 GNLNEIPLELVPHQ-----IYTVRRGFRYRFRIINAEYLNCPIVVSIDGHNLTAINSDGFDIEAM 575
             .||.:|..|.|..     ..||..|..|..|||||. ||..:.|::..|.||.:..|....:.:
plant   195 -TLNGLPGPLYPCSTKDTFTATVDAGKTYILRIINAA-LNNELFVAVANHTLTVVEVDAVYTKPV 257

  Fly   576 DVGSIVTYSGERFDFVLNAN-LEVGNYWIRLKGLMDCSEVFTSAFQVAILRYEGAPDEEPTAELS 639
            ...:|:...|:....:|.|: |..|.:.|.....:.....|.::..|..:||.|  ..:|...::
plant   258 HTKAIMIAPGQTTTLLLRADQLSGGEFLIAATPYVTSVFPFNNSTTVGFIRYTG--KTKPENSVN 320

  Fly   640 YGHKAEGIELNVMNRGPGYPDTKTVAEMRALPIYDHVSGIDHDTLKPEADYKFFIYYDFYTKNNP 704
            ...:.....::.:...|...|||...:.             .|::|.....|       |....|
plant   321 TRRRRRLTAMSTVVALPNMLDTKFATKF-------------SDSIKSLGSAK-------YPCKVP 365

  Fly   705 DFHDK------DLYAMDMEMTQ-----QNRLYTPQLNHITLNFPSLALLPS--RSQLK---DSDF 753
            ...||      .|...|..:.|     ..:.:...:|:|:...|.:::|.|  :.|.|   ..||
plant   366 TKIDKRVITTISLNLQDCPLNQTCDGYAGKRFFASMNNISFVRPPISILESYYKKQSKGVFSLDF 430

  Fly   754 CNE-TSLMD-QGIDCRQEFCKCH---HVLQVPLGAVVEMIIVDEGFQYYANHPFHLHGNAFRVMG 813
            ..: .:..| .|:|...|.....   .:.:|..|:.:|::.....|....|||.|:||:.|.|:|
plant   431 PEKPPNRFDFTGVDPVSENMNTEFGTKLFEVEFGSRLEIVFQGTSFLNIENHPLHVHGHNFFVVG 495

  Fly   814 LERLGENVTVEMIKQLDQFNLLKRNLDNPPVKDTVTIPDGGYTIIRFEASNPGYWLFHCHIEFHA 878
              |...|...|  |...::||:     :||.::|..:|.||:..||..|.|||.|..|||:|.|.
plant   496 --RGFGNFDPE--KDPKRYNLV-----DPPERNTFAVPTGGWAAIRINADNPGVWFIHCHLEQHT 551

  Fly   879 EIGMALVFKVGN----DDQMVPVPENFPTC 904
            ..|:|:.|.|.:    ...::|.|.:.|.|
plant   552 SWGLAMGFIVKDGPLPSQTLLPPPHDLPQC 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco1NP_609287.3 VWC 150..212 CDD:214564
CuRO_1_tcLCC2_insect_like 293..397 CDD:259927 42/104 (40%)
CuRO_2_tcLCC_insect_like 415..626 CDD:259951 40/216 (19%)
CuRO_3_tcLLC2_insect_like 728..897 CDD:259972 54/182 (30%)
LAC1NP_173252.2 laccase 28..581 CDD:274556 169/678 (25%)
Blue background indicates that the domain is not in the aligned region.

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