Protein Alignment Mco1 and sks3

DIOPT Version :10

• Sequence 1: NP_609287.3
• Gene: Mco1 / 34258
• FlyBaseID: FBgn0032116
• Length: 959
• Species: Drosophila melanogaster
• Sequence 2: NP_199656.2
• Gene: sks3 / 834900
• AraportID: AT5G48450
• Length: 621
• Species: Arabidopsis thaliana
• Alignment Length: 709
• Identity: 150/709 - (21%)
• Similarity: 241/709 - (33%)
• Gaps: 210/709 - (29%)

  Fly   294 GLERSITVVNRMMPGPAIEVCEGDEIVVDVKNHLLGESTSIHWHGLHQKKTPYMDGVPHITQCPI 358
            |..:.:..:|...|||.:.|.....:|::|||: |.|...:.|:|:..:|..:.|||.. |.|||
plant    44 GTRQQVIGINGQFPGPILNVTTNWNVVMNVKNN-LDEPLLLTWNGIQHRKNSWQDGVLG-TNCPI 106

  Fly   359 TPHATFRYSFPA-DLSGTHFWHSHTGMQRGDGVFGALIIRKPKTAEPHGGLYDFDLSEHVMIVQD 422
            .....:.|.|.. |..|:.|:...|..||..|.:|.:|:...........|.|.|::   :.:.|
plant   107 PSGWNWTYEFQVKDQIGSFFYFPSTNFQRASGGYGGIIVNNRAIIPVPFALPDGDVT---LFISD 168

  Fly   423 WIHDTGASIFSYHHHSRGDNKPHNLLVNGKGRYYNRIWAEAKQAHRRAEERTTQPVEPLPKSQVD 487
            |...:...:........|...|..:::||.|                          |...:...
plant   169 WYTKSHKKLRKDVESKNGLRPPDGIVINGFG--------------------------PFASNGSP 207

  Fly   488 FVQTLPRQARLAKTNTTKLFPVNSRQKRGNLNEIPLELVPHQIYTVRRGFRYRFRIIN---AEYL 549
            |                           |.:|             |..|..||||:.|   |..|
plant   208 F---------------------------GTIN-------------VEPGRTYRFRVHNSGIATSL 232

  Fly   550 NCPIVVSIDGHNLTAINSDG-FDIEA----MDVGSIVTYSGERFDFVLNANLEVGN-YWIRLKGL 608
            |    ..|..|||..:.::| :.|:.    ||:     :.|:.|.|::..:....| |:|
plant   233 N----FRIQNHNLLLVETEGSYTIQQNYTNMDI-----HVGQSFSFLVTMDQSGSNDYYI----- 283

  Fly   609 MDCSEVFTSAFQ---VAILRYEGA------PDEEPTAELS---YGHKAEGIELNVMNRGPGYPDT 661
             ..|..|.::.:   ||:|||..:      |..:|..||.   ..::|..:.|| ::.|...|:
plant   284 -VASPRFATSIKASGVAVLRYSNSQGPASGPLPDPPIELDTFFSMNQARSLRLN-LSSGAARPN- 345

  Fly   662 KTVAEMRALPIYDHVSGIDHDTLKPEADYKF--FIYYDFYT-KNNPDFHDKDLYAMDMEMTQQNR 723
                                    |:..:|:  ....|.|. .|.|.           ||. :.|
plant   346 ------------------------PQGSFKYGQITVTDVYVIVNRPP-----------EMI-EGR 374

  Fly   724 LYTPQLNHITLNFPSLALLPSRSQLKDSDFCNETSLMDQGIDCRQEFCKCH-----HVLQVPLGA 783
            |      ..|||  .::.||..:.||.:...|.:.:..  :|..:.....|     .|:......
plant   375 L------RATLN--GISYLPPATPLKLAQQYNISGVYK--LDFPKRPMNRHPRVDTSVINGTFKG 429

  Fly   784 VVEMIIVDEGFQYYANHPFHLHGNAFRVMGLERLGENVTVEMIKQLDQFNLLKR------NLDNP 842
            .||:|..:......:   :||.|.||.|:|::                |.|...      |..:.
plant   430 FVEIIFQNSDTTVKS---YHLDGYAFFVVGMD----------------FGLWTENSRSTYNKGDA 475

  Fly   843 PVKDTVTIPDGGYTIIRFEASNPGYWLFHCHIEFHAE--IGMALVFKVGN-----DDQMVPVPEN 900
            ..:.|..:..|.:|.:.....|.|.|  :..|:..|.  :|..|...|.|     |.....||:|
plant   476 VARSTTQVFPGAWTAVLVSLDNAGMW--NLRIDNLASWYLGQELYLSVVNPEIDIDSSENSVPKN 538

  Fly   901 FPTCGDYNPDLRSDGGTTEDSGSSKPITATPPNTGGGGSGLEPTWITLMISSMLVKLYR 959
            ...||..:|..:........|||.:.|..|...            |.|.:.::||.:.|
plant   539 SIYCGRLSPLQKDQAQRVNFSGSQRSIFVTSRG------------ILLALFAILVNINR 585

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mco1	NP_609287.3	VWC	150..212	CDD:214564
		CuRO_1_tcLCC2_insect_like	293..397	CDD:259927	33/103 (32%)
		CuRO_2_tcLCC_insect_like	415..626	CDD:259951	40/222 (18%)
		CuRO_3_tcLLC2_insect_like	728..897	CDD:259972	37/186 (20%)
sks3	NP_199656.2	PLN00044	17..559	CDD:165622	140/669 (21%)