DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco1 and LAC12

DIOPT Version :10

Sequence 1:NP_609287.3 Gene:Mco1 / 34258 FlyBaseID:FBgn0032116 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_196158.1 Gene:LAC12 / 830421 AraportID:AT5G05390 Length:565 Species:Arabidopsis thaliana


Alignment Length:641 Identity:161/641 - (25%)
Similarity:253/641 - (39%) Gaps:153/641 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 RSITVVNRMMPGPAIEVCEGDEIVVDVKNHLLGESTSIHWHGLHQKKTPYMDGVPHITQCPITPH 361
            |:...||.|.|||.:||..||.:.|.|.|......| |||||:.|.:|.:.||...:|||||.|.
plant    45 RNAITVNGMFPGPTLEVNNGDTLEVKVHNRARYNIT-IHWHGVRQIRTGWADGPEFVTQCPIRPG 108

  Fly   362 ATFRYSFPAD-LSGTHFWHSHTGMQRGDGVFGALIIRKPKTAEPHGGLYDFDLSEHVMIVQDWIH 425
            .::.|.|... ..||.:||:|:...|.. |:||||                            ||
plant   109 KSYTYRFTIQGQEGTLWWHAHSSWLRAT-VYGALI----------------------------IH 144

  Fly   426 DTGASIFSYHHHSRGDNKPHNLLVNGKGRYYNRIWAEAKQAHRRAEERTTQPVEPLPKSQVDFVQ 490
            .|..|.|.:       .||........|.::|                         .:.||.:.
plant   145 PTPGSSFPF-------PKPDRQTALMLGEWWN-------------------------ANPVDVIN 177

  Fly   491 TLPRQARLAKTNTTKLFPVNSRQKRGNL-NEIPLELVPHQIYTVRRGFRYRFRIINAEYLNCPIV 554
            ...|..  |..|.:..:.:|.:.  |:| |....|.|   :..:..|.....|:|||. ||.|:.
plant   178 QATRTG--AAPNISDAYTINGQP--GDLYNCSTKETV---VVPINSGETSLLRVINAA-LNQPLF 234

  Fly   555 VSIDGHNLTAINSDGFDIEAMDVGSIVTYSGERFDFVLNANLEVGNYWIRLKGLMDCSEV-FTSA 618
            .::..|.||.:.:|...::......::...|:..|.:|.|:.....|:|..:........ |.:.
plant   235 FTVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLLTADQPPKRYYIAARAYQSAQNAPFDNT 299

  Fly   619 FQVAILRYEGAPDEEPTAELSYGHKAEGIELNVMNRGPGYPDTKTVA----EMRALPIYDHVSGI 679
            ...|||:|:               |.......:|...|.:.||.||.    :.::|         
plant   300 TTTAILQYK---------------KTTTTSKPIMPVLPAFNDTNTVTSFSRKFKSL--------- 340

  Fly   680 DHDTLKPEA--DYKFF---IYYDFYTKNNPDFHDKDLYAMDMEMTQQNRLYTPQLNHITLNFPS- 738
             .:.:.|:.  |..||   :..|...|..|....:.|         ....:|..:|:::...|| 
plant   341 -RNVVVPKTIDDNLFFTIGLGLDNCPKKFPKSRCQGL---------NGTRFTASMNNVSFVLPSN 395

  Fly   739 LALL---------------PSRSQLK-DSDFCNETSLMDQGIDCRQEFCKCHHVLQVPLGAVVEM 787
            .:||               ||:..:| |....|.:..:.|.:       |...:.::..|:.|::
plant   396 FSLLQAHSNGIPGVFTTDFPSKPPVKFDYTGNNISRALFQPV-------KGTKLYKLKYGSRVQV 453

  Fly   788 IIVDEGFQYYANHPFHLHGNAFRVMGLERLGENVTVEMIKQLDQFNLLKRNLDNPPVKDTVTIPD 852
            ::.|.......|||.||||..|.::| |..| |...:  |...:|||:     :||:::||.:|.
plant   454 VLQDTNIVTSENHPIHLHGYDFYIVG-EGFG-NFNPK--KDTSKFNLV-----DPPLRNTVAVPV 509

  Fly   853 GGYTIIRFEASNPGYWLFHCHIEFHAEIGMALVFKVGND----DQMVPVPENFPTC 904
            .|:.:|||.|.|||.||.|||::.|.:.|:|:.|.|.|.    :.:...|.:.|.|
plant   510 NGWAVIRFVADNPGVWLMHCHLDVHIKWGLAMAFLVDNGVGELETLEAPPHDLPIC 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco1NP_609287.3 VWC 150..212 CDD:214564
CuRO_1_tcLCC2_insect_like 293..397 CDD:259927 43/100 (43%)
CuRO_2_tcLCC_insect_like 415..626 CDD:259951 42/212 (20%)
CuRO_3_tcLLC2_insect_like 728..897 CDD:259972 55/189 (29%)
LAC12NP_196158.1 laccase 24..565 CDD:274556 160/639 (25%)
Blue background indicates that the domain is not in the aligned region.

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