DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco1 and LAC6

DIOPT Version :10

Sequence 1:NP_609287.3 Gene:Mco1 / 34258 FlyBaseID:FBgn0032116 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_182180.1 Gene:LAC6 / 819269 AraportID:AT2G46570 Length:569 Species:Arabidopsis thaliana


Alignment Length:653 Identity:162/653 - (24%)
Similarity:255/653 - (39%) Gaps:182/653 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 ITVVNRMMPGPAIEVCEGDEIVVDVKNHLLGESTSIHWHGLHQKKTPYMDGVPHITQCPITPHAT 363
            |..||:..|||||...|.|.||:.|.| :...:|:|||||:.||::.:.||..:||||||....:
plant    52 IVTVNKKFPGPAISAQEDDRIVIKVIN-MTPYNTTIHWHGIKQKRSCWYDGPSYITQCPIQSGQS 115

  Fly   364 FRYSFP-ADLSGTHFWHSHTGMQRGDGVFGALIIRKPKTAEPHGGLYDF--DLSEHVMIVQD-WI 424
            |.|:|. |...||..||:|....|.. |:|.||: .||.:.|    |.|  ..:||.:::.: |:
plant   116 FTYNFKVAQQKGTFLWHAHFSWLRAT-VYGPLIV-YPKASVP----YPFKKPFNEHTILLGEYWL 174

  Fly   425 HDTGASIFSYHHH---SRGDNKPHN-LLVNGK-GRYYNRIWAEAKQAHRRAEERTTQPVEPLPKS 484
                .::.....|   |.|...|.: ..:||: |..||   ..:|..:.                
plant   175 ----KNVVELEQHVLESGGPPPPADAFTINGQPGPNYN---CSSKDVYE---------------- 216

  Fly   485 QVDFVQTLPRQARLAKTNTTKLFPVNSRQKRGNLNEIPLELVPHQIYTVRRGFRYRFRIINAEYL 549
                                                  :::||.:||.:        |:|||. :
plant   217 --------------------------------------IQIVPRKIYLL--------RLINAG-I 234

  Fly   550 NCPIVVSIDGHNLTAINSDGFDIEAMDVGSIVTYSGERFDFVLNANLEVGNYWIRLKGLMDCSEV 614
            |.....:|..|.||.:..||...:......::...|:..:.::.|:..||.|.:.:........|
plant   235 NMETFFTIANHRLTIVEVDGEYTKPYTTERVMLVPGQTMNILVTADQTVGRYSMAMGPYESAKNV 299

  Fly   615 -FTSAFQVAILRYEGAPDEEPTAELSYGHKAEGIELNVMNRGPGYPD---TKTVAE-MRALPIYD 674
             |.:...:|..:|.||.....|               |..:.|.:.|   .|||.: :|:|...|
plant   300 KFQNTSAIANFQYIGALPNNVT---------------VPAKLPIFNDNIAVKTVMDGLRSLNAVD 349

  Fly   675 HVSGID-HDTLKPEADYKFFIYYDF-----------------------YTKNNPDFHDKDLYAMD 715
            ....|| |          .||....                       .:.||..|.:..:..::
plant   350 VPRNIDAH----------LFITIGLNVNKCNSENPNNKCQGPRKGRLAASMNNISFIEPKVSILE 404

  Fly   716 MEMTQQNRLYTPQL-NHITLNFPSLALLPSRS----QLKDSDFCNETSLMDQGIDCRQEFCKCHH 775
                    .|..|| .:.||:||:   .|.::    ....:|..|:|           :......
plant   405 --------AYYKQLEGYFTLDFPT---TPEKAYDFVNGAPNDIANDT-----------QAANGTR 447

  Fly   776 VLQVPLGAVVEMIIVDEGFQYYANHPFHLHGNAFRVMGLERLGENVTVEMIKQLDQFNLLKRNLD 840
            .:....|:.:::|..:.|.....|||.||||::|.|:|..      |....:|..:|     ||:
plant   448 AIVFEYGSRIQIIFQNTGTLTTENHPIHLHGHSFYVIGYG------TGNYDQQTAKF-----NLE 501

  Fly   841 NPPVKDTVTIPDGGYTIIRFEASNPGYWLFHCHIEFHAEIGMALVFKVGN----DDQMVPVPENF 901
            :||..:|:.:|.||:..|||.|:|||.||.|||.:.|...||:.:|.|.|    .:.:...|.:.
plant   502 DPPYLNTIGVPVGGWAAIRFVANNPGLWLLHCHFDIHQTWGMSTMFIVKNGKKVQESLPHPPADL 566

  Fly   902 PTC 904
            |.|
plant   567 PKC 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco1NP_609287.3 VWC 150..212 CDD:214564
CuRO_1_tcLCC2_insect_like 293..397 CDD:259927 44/98 (45%)
CuRO_2_tcLCC_insect_like 415..626 CDD:259951 36/217 (17%)
CuRO_3_tcLLC2_insect_like 728..897 CDD:259972 52/177 (29%)
LAC6NP_182180.1 laccase 29..569 CDD:274556 161/651 (25%)
Blue background indicates that the domain is not in the aligned region.

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