DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco1 and LAC2

DIOPT Version :10

Sequence 1:NP_609287.3 Gene:Mco1 / 34258 FlyBaseID:FBgn0032116 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_180477.1 Gene:LAC2 / 817462 AraportID:AT2G29130 Length:573 Species:Arabidopsis thaliana


Alignment Length:669 Identity:147/669 - (21%)
Similarity:244/669 - (36%) Gaps:204/669 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 RSITVVNRMMPGPAIEVCEGDEIVVDVKNHLLGESTSIHWHGLHQKKTPYMDGVPHITQCPITPH 361
            ::|..||...|||.:...|||.:.:.|.|| :..:.||||||:.|.::.:.||..::|||||...
plant    48 KTIVTVNGKFPGPRVTAREGDNLQIKVVNH-VSNNISIHWHGIRQLRSGWADGPSYVTQCPIRMG 111

  Fly   362 ATFRYSFP-ADLSGTHFWHSHTGMQRGDGVFGALIIRKPKTAEPHGGLYDF--DLSEHVMIVQDW 423
            .::.|:|. ....||.:||:|....|.. |:|.||| .||..:|    |.|  ...:..::..:|
plant   112 QSYVYNFTVTGQRGTLWWHAHIQWMRAT-VYGPLII-LPKLHQP----YPFPKPYKQVPILFGEW 170

  Fly   424 IH-DTGASIFSYHHHSRGDNKPHNLLVNG-KGRYYNRIWAEAKQAHRRAEERTTQPVEPLPKSQV 486
            .: |..|.:........|.|.......|| .|..||                             
plant   171 FNADPQAVVQQALQTGAGPNASDAHTFNGLPGPLYN----------------------------- 206

  Fly   487 DFVQTLPRQARLAKTNTTKLFPVNSRQKRGNLNEIPLELVPHQIYTVRRGFRYRFRIINAEYLNC 551
                       .:..:|.||.                         |:.|..|..|:|||. ||.
plant   207 -----------CSTKDTYKLM-------------------------VKPGKTYLLRLINAA-LND 234

  Fly   552 PIVVSIDGHNLTAINSDGFDIEAMDVGSIVTYSGERFDFVL-------NANL-EVGNYWIRLKGL 608
            .:..:|..|.||.:.:|...::......::...|:..:.:|       ||.. .:...:...:|.
plant   235 ELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPIYPNATFYMLARPYFTGQGT 299

  Fly   609 MDCSEVFTSAFQVAILRYEGAPDEEPTAELSYGHKAEGIELNVMNRGPGYPDTKTVAEMRALPIY 673
            :|.:.|      ..||:|:             .|......|:::.  |..|           || 
plant   300 IDNTTV------AGILQYQ-------------HHTKSSKNLSIIK--PSLP-----------PI- 331

  Fly   674 DHVSGIDHDTLKPEADY-KFF--IYYDFYTKNNPDFHDKDLY---AMDMEMTQQNRL-------- 724
                    ::....|:: |.|  :....:..|.|...||..:   .:......:|:.        
plant   332 --------NSTSYAANFTKMFRSLASSTFPANVPKVVDKQYFFAIGLGTNPCPKNQTCQGPTNTT 388

  Fly   725 -YTPQLNHITLNFPSLALLPSRSQLKDSDFCNET-------------------------SLMDQG 763
             :...:|:::.      :||:::.|..|.|..::                         :::.:|
plant   389 KFAASINNVSF------ILPNKTSLLQSYFVGKSKNVFMTDFPTAPIIPFNYTGTPPNNTMVSRG 447

  Fly   764 IDCRQEFCKCHHVLQVPLGAVVEMIIVDEGFQYYANHPFHLHGNAFRVMGLERLGENVTVEMIKQ 828
            .          .|:.:.....||:::..........||.||||..|.|:|             :.
plant   448 T----------KVVVLKYKTTVELVLQGTSILGIEAHPIHLHGFNFYVVG-------------QG 489

  Fly   829 LDQFNLLK----RNLDNPPVKDTVTIPDGGYTIIRFEASNPGYWLFHCHIEFHAEIGMALVFKVG 889
            ...||..:    .||.:|..::|:.||.||:..|||.|.|||.||.|||||.|...|:.:.:.|.
plant   490 FGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVVL 554

  Fly   890 NDD----QMVPVPENFPTC 904
            :.|    :::|.|.:||.|
plant   555 DGDLPNQKLLPPPSDFPKC 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco1NP_609287.3 VWC 150..212 CDD:214564
CuRO_1_tcLCC2_insect_like 293..397 CDD:259927 38/100 (38%)
CuRO_2_tcLCC_insect_like 415..626 CDD:259951 36/220 (16%)
CuRO_3_tcLLC2_insect_like 728..897 CDD:259972 47/201 (23%)
LAC2NP_180477.1 laccase 27..573 CDD:274556 146/667 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.