DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco1 and Heph

DIOPT Version :10

Sequence 1:NP_609287.3 Gene:Mco1 / 34258 FlyBaseID:FBgn0032116 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_034547.2 Gene:Heph / 15203 MGIID:1332240 Length:1157 Species:Mus musculus


Alignment Length:757 Identity:154/757 - (20%)
Similarity:233/757 - (30%) Gaps:272/757 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 GPAIEVCEGDEIVVDVKNHLLGESTSIHWHGLHQKK----TPYMDGVPH---------IT-QCPI 358
            ||.|....||.|.|...|. ..:..||..||:..:|    |.|.||..|         :| ...:
Mouse   457 GPVIRAEVGDTIQVVFYNR-ASQPFSIQPHGVFYEKNSEGTVYNDGTSHPKVAKSFEKVTYYWTV 520

  Fly   359 TPHATFRYSFPADLSGTHFWHSHTGMQRGDGVFGALIIRKP------------------------ 399
            .|||......||.|:..:|..:........|:.|.|::.|.                        
Mouse   521 PPHAGPTAQDPACLTWMYFSAADPTRDTNSGLVGPLLVCKAGALGADGKQKGVDKEFFLLFTVFD 585

  Fly   400 ------KTAEPHGGLYDFD-LSEHVMIVQD--WIHDTGASIFSYHHH---SRGDNKPHNLLVNGK 452
                  ..|....|:.|.. |||.|...||  .:|.....:||....   .:||....:||  |.
Mouse   586 ENESWYNNANQAAGMLDSRLLSEDVEGFQDSNRMHAINGFLFSNLPRLDMCKGDTVAWHLL--GL 648

  Fly   453 GRYYNRIWAEAKQAHRRAEERTTQPVEPLPKSQV-----DFVQTLPRQARLAKTNTTKLFPVNSR 512
            |        .....|....|..|..::.:.|..|     .||      ..:.:.:...:|.:.. 
Mouse   649 G--------TETDVHGVMFEGNTVQLQGMRKGAVMLFPHTFV------TAIMQPDNPGIFEIYC- 698

  Fly   513 QKRGNLNEIPLELV------------PHQIYTVRRGFRYRFRIINAEYLNCP-IVVSIDGHNLT- 563
             :.|:..|..::.:            |.|.|...|.:......|..:|  || ....::.||.: 
Mouse   699 -QAGSHREEGMQAIYNVSQCSSHQDSPRQHYQASRVYYIMAEEIEWDY--CPDRSWELEWHNTSE 760

  Fly   564 --------AINSDG------------------FDIEAM-----------------DVGSIVTYSG 585
                    ..|.||                  |.|...                 :||.|:|   
Mouse   761 KDSYGHVFLSNKDGLLGSKYKKAVFREYTDGTFRIPRPRSGPEEHLGILGPLIRGEVGDILT--- 822

  Fly   586 ERFDFVLNANLEVGNYWIRLKGLMDCSEVFTSAFQVAILRYEGAPD-EEPTAELSYGHKAEGIEL 649
                 |:..|.....|.|...|:::.:              .|.|. .||...|:|       :.
Mouse   823 -----VVFKNKASRPYSIHAHGVLESN--------------TGGPQAAEPGEVLTY-------QW 861

  Fly   650 NVMNR-GPGYPDTKTVAEM---RALPIYDHVSGI-------DHDTLKP-----EADYKF---FIY 695
            |:..| |||..|:..|:.:   ...||.|..||:       .:..|:|     :.|.:|   |:.
Mouse   862 NIPERSGPGPSDSACVSWIYYSAVDPIKDMYSGLVGPLVICRNGILEPNGGRNDMDREFALLFLI 926

  Fly   696 YDFYTKNNPDFHDKDLYAMDMEMTQQNRLYTPQLNHITLNFPSLALLPSRSQLKDSDFCNETSLM 760
            :|    .|..::.|:..|          .|.||.:             |...|||:.|.....: 
Mouse   927 FD----ENQSWYLKENIA----------TYGPQES-------------SHVNLKDATFLESNKM- 963

  Fly   761 DQGIDCRQEFCKCHHVLQVPLGAVVEMIIVDEG--FQYYA--------NHPFHLHGNAFRVMGLE 815
                          |.:...|.|.:..:.|.:|  ..:|.        .|..|.|..:|    |.
Mouse   964 --------------HAINGKLYANLRGLTVYQGERVAWYMLAMGQDTDIHTVHFHAESF----LY 1010

  Fly   816 RLGENVTVEMIKQLDQFNLLKRNLDNPPVKDTVTIPDGGYTIIRFEASNPGYWLFHCHIEFHAEI 880
            :.|::...                      |.|.:..|.:.::...|||||.||.|||:..|...
Mouse  1011 QNGQSYRA----------------------DVVDLFPGTFEVVEMVASNPGTWLMHCHVTDHVHA 1053

  Fly   881 GMALVFKVGNDDQMVPVPENFPTCGDYNPD------LRSDGG 916
            ||..:|.|.:.:      |:|.|......:      ||..||
Mouse  1054 GMETIFTVLSHE------EHFSTMTTITKEIGKAVILRDIGG 1089

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco1NP_609287.3 VWC 150..212 CDD:214564
CuRO_1_tcLCC2_insect_like 293..397 CDD:259927 29/102 (28%)
CuRO_2_tcLCC_insect_like 415..626 CDD:259951 47/277 (17%)
CuRO_3_tcLLC2_insect_like 728..897 CDD:259972 36/178 (20%)
HephNP_034547.2 CuRO_1_ceruloplasmin 26..208 CDD:259884
CuRO_2_ceruloplasmin 223..363 CDD:259907
CuRO_3_ceruloplasmin 377..571 CDD:259886 30/114 (26%)
Cupredoxin 574..717 CDD:473140 28/160 (18%)
CuRO_5_ceruloplasmin 732..903 CDD:259887 39/201 (19%)
Cupredoxin 919..1062 CDD:473140 43/210 (20%)
Blue background indicates that the domain is not in the aligned region.

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