DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mco1 and hephl1b

DIOPT Version :10

Sequence 1:NP_609287.3 Gene:Mco1 / 34258 FlyBaseID:FBgn0032116 Length:959 Species:Drosophila melanogaster
Sequence 2:XP_068080063.2 Gene:hephl1b / 101886332 ZFINID:ZDB-GENE-091204-388 Length:1089 Species:Danio rerio


Alignment Length:699 Identity:117/699 - (16%)
Similarity:200/699 - (28%) Gaps:296/699 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 VEWY-----QTFSKACYDCPRNL--TDCSRPHCVMGDGLERSITVVNRMMPG--PAIEVCEGDEI 319
            :.||     :||.....| |.||  .:.::.|            .||..|.|  |.:|:.:|.. 
Zfish   594 LSWYLDQNIETFGTNESD-PENLDFQESNKMH------------AVNGFMYGNLPGLEMNKGSR- 644

  Fly   320 VVDVKNHLLGESTSIHWHGLH-QKKTPYMDGVPHITQCPITPHATFRYSFPADLSGTH-----FW 378
               |:.||||..|.:..||:: |..|....|..|.| ..:.||.........|:||..     .|
Zfish   645 ---VRWHLLGLGTEMDIHGIYFQGNTFEKQGTTHDT-LSLFPHTAVTVFMQPDVSGVFELSCLVW 705

  Fly   379 -HSHTGMQRGDGVFGALIIRKPKTAEPHGGLYDFDLSEHVMIVQ--DWIHDTGASIFSYHHHSRG 440
             |..:||::...|.|      |:..||  .:...:..|:.:..:  :|.:....:....:.::..
Zfish   706 DHYDSGMRQLYEVTG------PRYEEP--SVSPSETVEYFISAEELEWDYSPDRTWELQNFNTTE 762

  Fly   441 DNKPHNLLVNGKG-----RYYNRIWAEAKQA------HRRAEERTTQPVEPLPKSQVDFVQTLPR 494
            |..|.:|.|...|     :|...::.|...|      .|..:|...:.:.|:.:::|.       
Zfish   763 DESPGSLFVGTGGNKLGSKYKKVVYREYTDATFRTRIEREPQETHLEILGPMIRAEVG------- 820

  Fly   495 QARLAKTNTTKLFPVNSRQKRGNLNEIPLELVPHQIYTVRRGFRYRFRIINAEYLN-CPIVVSID 558
                                                           :::...::| .....||.
Zfish   821 -----------------------------------------------QVLLITFMNKASHAYSIQ 838

  Fly   559 GHNLTAINSDGFDIEAMDVGSIVTYSGERFDFVLNANLEVGNYWIRLKGLMDCSEVFTSAFQVAI 623
            .|.:.:..|..   ||:..|::..|.                 ||                    
Zfish   839 AHGVRSFTSKP---EAVMPGNMTQYQ-----------------WI-------------------- 863

  Fly   624 LRYEGAPDEEPTAELSYGHKAEGIELNVMNRGPGYPDTKTVAEMRALP---IYDHVSG------- 678
                 .|::.                     |||..|...:|......   :.|..||       
Zfish   864 -----IPEKS---------------------GPGVSDPNCIAFAYCSAVDFVKDTASGLIGPLMI 902

  Fly   679 -----IDHDTLKPEADYKF---FIYYD----FYTKNNPD--FHDKDLYAMDMEMTQQNRLYTPQL 729
                 ::.|..:.:.|.:|   |:.:|    :|.:.|.:  ::..:....|.|..:.|::|    
Zfish   903 CRKGTLNQDRQRTDVDREFALLFMVFDENKSWYLEENIESYYNSSEPLLRDDEFQKSNKMY---- 963

  Fly   730 NHITLNFPSLALLPSRSQLKDSDFCNETSLMDQGIDCRQEFCKCHHVLQVPLGAV------VEMI 788
                                             ||:                |.|      :||:
Zfish   964 ---------------------------------GIN----------------GKVYANLRGLEMV 979

  Fly   789 IVDEGFQYYAN-------HPFHLHGNAFRVMGLERLGENVTVEMIKQLDQFNLLKRNLDNPPVKD 846
            :.:....|...       |..|.|...|          ....:...:.|.::|            
Zfish   980 VGERVVWYLFGMGNEADIHTVHFHAETF----------TYKTDHTHRTDVYDL------------ 1022

  Fly   847 TVTIPDGGYTIIRFEASNPGYWLFHCHIEFHAEIGMALVF----KVGND 891
               || |.:..:...|...|.||.|||:..|...||...|    :.|.|
Zfish  1023 ---IP-GSFQTLEMVAEVNGTWLLHCHVSHHILGGMDTTFIIKPRSGGD 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mco1NP_609287.3 VWC 150..212 CDD:214564
CuRO_1_tcLCC2_insect_like 293..397 CDD:259927 31/112 (28%)
CuRO_2_tcLCC_insect_like 415..626 CDD:259951 25/224 (11%)
CuRO_3_tcLLC2_insect_like 728..897 CDD:259972 29/181 (16%)
hephl1bXP_068080063.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.